Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 NTF6G-201ENST00000591094 616 ntBASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSL3PQ5NE16 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.56■□□□□ 0.88
CTSL3PQ5NE16 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 KRT19P1-201ENST00000405746 1186 ntBASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 AC120498.10-201ENST00000621827 505 ntBASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
CTSL3PQ5NE16 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 KRT18P20-201ENST00000548986 1279 ntBASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSL3PQ5NE16 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 AC121338.2-201ENST00000622535 1744 ntBASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSL3PQ5NE16 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 KRT18P5-201ENST00000436075 1291 ntBASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.52■□□□□ 0.88
CTSL3PQ5NE16 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 AC006128.1-201ENST00000624704 1661 ntBASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSL3PQ5NE16 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms