Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 KRT87P-202ENST00000534226 1464 ntBASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KHDC1Q4VXA5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 AF106564.1-201ENST00000607058 2553 ntBASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KHDC1Q4VXA5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KHDC1Q4VXA5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
KHDC1Q4VXA5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KHDC1Q4VXA5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KHDC1Q4VXA5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KHDC1Q4VXA5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
KHDC1Q4VXA5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KHDC1Q4VXA5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KHDC1Q4VXA5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KHDC1Q4VXA5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms