Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 AC245052.3-201ENST00000450182 901 ntBASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHROOM1Q2M3G4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 KRT18P29-201ENST00000397031 1267 ntBASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 ESRRAP1-201ENST00000400596 1257 ntBASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHROOM1Q2M3G4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 CYP2T3P-201ENST00000601990 817 ntBASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 FAM21FP-204ENST00000608637 956 ntBASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SHROOM1Q2M3G4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SHROOM1Q2M3G4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SHROOM1Q2M3G4 AC242852.2-201ENST00000615738 1807 ntBASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SHROOM1Q2M3G4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 LSM12P1-201ENST00000411836 588 ntBASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 AC093827.2-201ENST00000512654 315 ntBASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.44■■□□□ 1.5
SHROOM1Q2M3G4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHROOM1Q2M3G4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SHROOM1Q2M3G4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms