Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDK3Q00526 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK3Q00526 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK3Q00526 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK3Q00526 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK3Q00526 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK3Q00526 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CDK3Q00526 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDK3Q00526 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK3Q00526 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK3Q00526 AC093787.1-201ENST00000450396 207 ntBASIC20.56■□□□□ 0.88
CDK3Q00526 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK3Q00526 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK3Q00526 RARRES2P4-201ENST00000514074 484 ntBASIC20.56■□□□□ 0.88
CDK3Q00526 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.56■□□□□ 0.88
CDK3Q00526 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDK3Q00526 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK3Q00526 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK3Q00526 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.55■□□□□ 0.88
CDK3Q00526 AL512625.2-201ENST00000417533 625 ntBASIC20.55■□□□□ 0.88
CDK3Q00526 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK3Q00526 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.55■□□□□ 0.88
CDK3Q00526 AC142086.2-201ENST00000569753 217 ntBASIC20.55■□□□□ 0.88
CDK3Q00526 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CDK3Q00526 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK3Q00526 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK3Q00526 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
CDK3Q00526 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDK3Q00526 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDK3Q00526 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CDK3Q00526 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDK3Q00526 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.54■□□□□ 0.88
CDK3Q00526 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.54■□□□□ 0.88
CDK3Q00526 MKRN4P-201ENST00000444706 1521 ntBASIC20.54■□□□□ 0.88
CDK3Q00526 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK3Q00526 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDK3Q00526 CDV3P1-201ENST00000471403 739 ntBASIC20.54■□□□□ 0.88
CDK3Q00526 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK3Q00526 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK3Q00526 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK3Q00526 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK3Q00526 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDK3Q00526 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.53■□□□□ 0.88
CDK3Q00526 AL138781.1-201ENST00000566567 1274 ntBASIC20.53■□□□□ 0.88
CDK3Q00526 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.53■□□□□ 0.88
CDK3Q00526 FAM21FP-204ENST00000608637 956 ntBASIC20.53■□□□□ 0.88
CDK3Q00526 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.53■□□□□ 0.88
CDK3Q00526 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.53■□□□□ 0.88
CDK3Q00526 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.53■□□□□ 0.88
CDK3Q00526 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDK3Q00526 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDK3Q00526 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDK3Q00526 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK3Q00526 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDK3Q00526 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.52■□□□□ 0.88
CDK3Q00526 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.52■□□□□ 0.88
CDK3Q00526 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.52■□□□□ 0.88
CDK3Q00526 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.52■□□□□ 0.88
CDK3Q00526 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDK3Q00526 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 Z98882.1-201ENST00000622160 2253 ntBASIC20.52■□□□□ 0.88
CDK3Q00526 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK3Q00526 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDK3Q00526 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.52■□□□□ 0.87
CDK3Q00526 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDK3Q00526 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDK3Q00526 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK3Q00526 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.51■□□□□ 0.87
CDK3Q00526 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK3Q00526 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK3Q00526 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK3Q00526 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms