Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.83■□□□□ 0.6
RPS4XP62701 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4XP62701 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.83■□□□□ 0.6
RPS4XP62701 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS4XP62701 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4XP62701 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RPS4XP62701 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPS4XP62701 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4XP62701 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
RPS4XP62701 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.83■□□□□ 0.6
RPS4XP62701 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPS4XP62701 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4XP62701 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RPS4XP62701 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.82■□□□□ 0.6
RPS4XP62701 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS4XP62701 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RPS4XP62701 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS4XP62701 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS4XP62701 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 AL157384.1-201ENST00000445995 2473 ntBASIC18.81■□□□□ 0.6
RPS4XP62701 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RPS4XP62701 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 PLK5-205ENST00000642079 1969 ntBASIC18.81■□□□□ 0.6
RPS4XP62701 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS4XP62701 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4XP62701 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4XP62701 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RPS4XP62701 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.81■□□□□ 0.6
RPS4XP62701 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4XP62701 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4XP62701 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4XP62701 AC006128.1-201ENST00000624704 1661 ntBASIC18.81■□□□□ 0.6
RPS4XP62701 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS4XP62701 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS4XP62701 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RPS4XP62701 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
RPS4XP62701 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RPS4XP62701 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPS4XP62701 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPS4XP62701 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.8■□□□□ 0.6
RPS4XP62701 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS4XP62701 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4XP62701 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.8■□□□□ 0.6
RPS4XP62701 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RPS4XP62701 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4XP62701 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RPS4XP62701 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4XP62701 LINC01521-201ENST00000504184 1943 ntBASIC18.79■□□□□ 0.6
RPS4XP62701 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4XP62701 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.79■□□□□ 0.6
RPS4XP62701 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS4XP62701 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4XP62701 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.79■□□□□ 0.6
RPS4XP62701 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS4XP62701 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4XP62701 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.78■□□□□ 0.6
RPS4XP62701 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms