Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.04■□□□□ 0.96
AP1S1P61966 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
AP1S1P61966 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
AP1S1P61966 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.04■□□□□ 0.96
AP1S1P61966 CNN2P6-201ENST00000439038 900 ntBASIC21.04■□□□□ 0.96
AP1S1P61966 CDCA4P2-201ENST00000441182 718 ntBASIC21.04■□□□□ 0.96
AP1S1P61966 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
AP1S1P61966 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP1S1P61966 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S1P61966 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP1S1P61966 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S1P61966 AC007322.1-201ENST00000426983 750 ntBASIC21.03■□□□□ 0.96
AP1S1P61966 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.03■□□□□ 0.96
AP1S1P61966 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.03■□□□□ 0.96
AP1S1P61966 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S1P61966 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.03■□□□□ 0.96
AP1S1P61966 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S1P61966 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.03■□□□□ 0.96
AP1S1P61966 RAP2CP1-201ENST00000605103 478 ntBASIC21.03■□□□□ 0.96
AP1S1P61966 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
AP1S1P61966 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP1S1P61966 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.03■□□□□ 0.96
AP1S1P61966 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP1S1P61966 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.02■□□□□ 0.96
AP1S1P61966 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.02■□□□□ 0.96
AP1S1P61966 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.02■□□□□ 0.96
AP1S1P61966 AC026185.1-201ENST00000445748 174 ntBASIC21.02■□□□□ 0.96
AP1S1P61966 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.02■□□□□ 0.96
AP1S1P61966 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP1S1P61966 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
AP1S1P61966 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.02■□□□□ 0.95
AP1S1P61966 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP1S1P61966 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
AP1S1P61966 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
AP1S1P61966 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S1P61966 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S1P61966 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S1P61966 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP1S1P61966 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S1P61966 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP1S1P61966 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP1S1P61966 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
AP1S1P61966 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.01■□□□□ 0.95
AP1S1P61966 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
AP1S1P61966 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.01■□□□□ 0.95
AP1S1P61966 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
AP1S1P61966 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP1S1P61966 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 AL024507.2-201ENST00000606070 2574 ntBASIC21■□□□□ 0.95
AP1S1P61966 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP1S1P61966 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP1S1P61966 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21■□□□□ 0.95
AP1S1P61966 AC091799.1-201ENST00000422823 811 ntBASIC21■□□□□ 0.95
AP1S1P61966 AL162412.1-201ENST00000567129 965 ntBASIC21■□□□□ 0.95
AP1S1P61966 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21■□□□□ 0.95
AP1S1P61966 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
AP1S1P61966 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21■□□□□ 0.95
AP1S1P61966 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
AP1S1P61966 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21■□□□□ 0.95
AP1S1P61966 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21■□□□□ 0.95
AP1S1P61966 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
AP1S1P61966 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
AP1S1P61966 FEM1AP4-201ENST00000443167 1987 ntBASIC20.99■□□□□ 0.95
AP1S1P61966 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.99■□□□□ 0.95
AP1S1P61966 AL591742.1-201ENST00000604433 565 ntBASIC20.99■□□□□ 0.95
AP1S1P61966 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.99■□□□□ 0.95
AP1S1P61966 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
AP1S1P61966 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S1P61966 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.98■□□□□ 0.95
AP1S1P61966 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.98■□□□□ 0.95
AP1S1P61966 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
AP1S1P61966 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AP1S1P61966 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms