Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.26■□□□□ 0.35
RIPPLY3P57055 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 AC026471.5-201ENST00000615068 467 ntBASIC17.26■□□□□ 0.35
RIPPLY3P57055 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPPLY3P57055 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPPLY3P57055 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 AC092368.3-202ENST00000574180 1591 ntBASIC17.25■□□□□ 0.35
RIPPLY3P57055 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 POM121L13P-201ENST00000422362 380 ntBASIC17.25■□□□□ 0.35
RIPPLY3P57055 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPPLY3P57055 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RIPPLY3P57055 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 AP003071.4-201ENST00000562276 1284 ntBASIC17.24■□□□□ 0.35
RIPPLY3P57055 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 RARRES2P10-201ENST00000564312 460 ntBASIC17.24■□□□□ 0.35
RIPPLY3P57055 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 SOX15-203ENST00000570788 1093 ntBASIC17.24■□□□□ 0.35
RIPPLY3P57055 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RIPPLY3P57055 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIPPLY3P57055 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
RIPPLY3P57055 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 WWOX-216ENST00000569818 525 ntBASIC17.23■□□□□ 0.35
RIPPLY3P57055 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RIPPLY3P57055 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIPPLY3P57055 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 CRYGFP-201ENST00000418459 633 ntBASIC17.22■□□□□ 0.35
RIPPLY3P57055 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIPPLY3P57055 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.22■□□□□ 0.35
RIPPLY3P57055 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms