Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PER3P56645 AC008687.6-201ENST00000596318 630 ntBASIC19.2■□□□□ 0.66
PER3P56645 AP006294.2-201ENST00000641667 209 ntBASIC19.2■□□□□ 0.66
PER3P56645 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.2■□□□□ 0.66
PER3P56645 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PER3P56645 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PER3P56645 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.19■□□□□ 0.66
PER3P56645 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PER3P56645 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
PER3P56645 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PER3P56645 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.19■□□□□ 0.66
PER3P56645 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PER3P56645 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PER3P56645 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.18■□□□□ 0.66
PER3P56645 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.18■□□□□ 0.66
PER3P56645 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.18■□□□□ 0.66
PER3P56645 RNA5SP413-201ENST00000516373 109 ntBASIC19.18■□□□□ 0.66
PER3P56645 KRT18P20-201ENST00000548986 1279 ntBASIC19.18■□□□□ 0.66
PER3P56645 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.18■□□□□ 0.66
PER3P56645 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.18■□□□□ 0.66
PER3P56645 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PER3P56645 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PER3P56645 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PER3P56645 OR7E47P-201ENST00000546390 1422 ntBASIC19.17■□□□□ 0.66
PER3P56645 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.17■□□□□ 0.66
PER3P56645 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PER3P56645 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PER3P56645 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PER3P56645 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PER3P56645 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PER3P56645 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.17■□□□□ 0.66
PER3P56645 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.17■□□□□ 0.66
PER3P56645 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PER3P56645 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PER3P56645 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PER3P56645 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PER3P56645 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.16■□□□□ 0.66
PER3P56645 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PER3P56645 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
PER3P56645 AC010536.3-201ENST00000620306 533 ntBASIC19.16■□□□□ 0.66
PER3P56645 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.16■□□□□ 0.66
PER3P56645 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PER3P56645 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PER3P56645 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.16■□□□□ 0.66
PER3P56645 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.16■□□□□ 0.66
PER3P56645 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.16■□□□□ 0.66
PER3P56645 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.15■□□□□ 0.66
PER3P56645 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 AP004607.7-201ENST00000527152 1677 ntBASIC19.15■□□□□ 0.66
PER3P56645 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 AC013268.1-206ENST00000638368 961 ntBASIC19.15■□□□□ 0.66
PER3P56645 AC112229.1-201ENST00000639295 961 ntBASIC19.15■□□□□ 0.66
PER3P56645 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PER3P56645 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.15■□□□□ 0.66
PER3P56645 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PER3P56645 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.15■□□□□ 0.66
PER3P56645 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.15■□□□□ 0.66
PER3P56645 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PER3P56645 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PER3P56645 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PER3P56645 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PER3P56645 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PER3P56645 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms