Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SUMO3P55854 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
SUMO3P55854 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.92■□□□□ 0.62
SUMO3P55854 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.92■□□□□ 0.62
SUMO3P55854 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
SUMO3P55854 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.92■□□□□ 0.62
SUMO3P55854 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SUMO3P55854 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SUMO3P55854 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SUMO3P55854 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.92■□□□□ 0.62
SUMO3P55854 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.92■□□□□ 0.62
SUMO3P55854 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SUMO3P55854 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SUMO3P55854 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.92■□□□□ 0.62
SUMO3P55854 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.91■□□□□ 0.62
SUMO3P55854 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SUMO3P55854 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.91■□□□□ 0.62
SUMO3P55854 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SUMO3P55854 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SUMO3P55854 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SUMO3P55854 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.91■□□□□ 0.62
SUMO3P55854 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.91■□□□□ 0.62
SUMO3P55854 AC022517.1-201ENST00000592429 346 ntBASIC18.91■□□□□ 0.62
SUMO3P55854 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SUMO3P55854 AC007375.3-201ENST00000600936 2314 ntBASIC18.91■□□□□ 0.62
SUMO3P55854 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.91■□□□□ 0.62
SUMO3P55854 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SUMO3P55854 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SUMO3P55854 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SUMO3P55854 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.9■□□□□ 0.62
SUMO3P55854 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.9■□□□□ 0.62
SUMO3P55854 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.9■□□□□ 0.62
SUMO3P55854 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.9■□□□□ 0.62
SUMO3P55854 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.9■□□□□ 0.62
SUMO3P55854 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SUMO3P55854 AC010536.3-201ENST00000620306 533 ntBASIC18.9■□□□□ 0.62
SUMO3P55854 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.9■□□□□ 0.62
SUMO3P55854 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.9■□□□□ 0.62
SUMO3P55854 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SUMO3P55854 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SUMO3P55854 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.89■□□□□ 0.61
SUMO3P55854 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SUMO3P55854 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.89■□□□□ 0.61
SUMO3P55854 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SUMO3P55854 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
SUMO3P55854 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUMO3P55854 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.88■□□□□ 0.61
SUMO3P55854 CLDN5-201ENST00000403084 2357 ntBASIC18.88■□□□□ 0.61
SUMO3P55854 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.88■□□□□ 0.61
SUMO3P55854 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.88■□□□□ 0.61
SUMO3P55854 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SUMO3P55854 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.88■□□□□ 0.61
SUMO3P55854 MFSD11-216ENST00000590393 1141 ntBASIC18.88■□□□□ 0.61
SUMO3P55854 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUMO3P55854 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SUMO3P55854 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SUMO3P55854 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SUMO3P55854 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SUMO3P55854 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.87■□□□□ 0.61
SUMO3P55854 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SUMO3P55854 TERF1P5-201ENST00000477545 1207 ntBASIC18.87■□□□□ 0.61
SUMO3P55854 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.87■□□□□ 0.61
SUMO3P55854 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SUMO3P55854 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.87■□□□□ 0.61
SUMO3P55854 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
SUMO3P55854 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUMO3P55854 BID-214ENST00000617586 542 ntTSL 5 BASIC18.87■□□□□ 0.61
SUMO3P55854 AC013268.1-206ENST00000638368 961 ntBASIC18.87■□□□□ 0.61
SUMO3P55854 AC112229.1-201ENST00000639295 961 ntBASIC18.87■□□□□ 0.61
SUMO3P55854 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.87■□□□□ 0.61
SUMO3P55854 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.86■□□□□ 0.61
SUMO3P55854 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms