Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
PRRX1P54821 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
PRRX1P54821 NTF6G-201ENST00000591094 616 ntBASIC17.14■□□□□ 0.33
PRRX1P54821 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.14■□□□□ 0.33
PRRX1P54821 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.14■□□□□ 0.33
PRRX1P54821 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRRX1P54821 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 AP004607.4-201ENST00000530158 1459 ntBASIC17.13■□□□□ 0.33
PRRX1P54821 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 AC026271.2-201ENST00000428091 497 ntBASIC17.13■□□□□ 0.33
PRRX1P54821 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.13■□□□□ 0.33
PRRX1P54821 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRRX1P54821 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.13■□□□□ 0.33
PRRX1P54821 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.13■□□□□ 0.33
PRRX1P54821 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRRX1P54821 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 AC004854.2-201ENST00000608450 1441 ntBASIC17.13■□□□□ 0.33
PRRX1P54821 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRRX1P54821 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.12■□□□□ 0.33
PRRX1P54821 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.12■□□□□ 0.33
PRRX1P54821 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.12■□□□□ 0.33
PRRX1P54821 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRRX1P54821 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.12■□□□□ 0.33
PRRX1P54821 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.12■□□□□ 0.33
PRRX1P54821 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.12■□□□□ 0.33
PRRX1P54821 AC010141.2-201ENST00000452426 721 ntBASIC17.12■□□□□ 0.33
PRRX1P54821 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.12■□□□□ 0.33
PRRX1P54821 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 KRT18P20-201ENST00000548986 1279 ntBASIC17.12■□□□□ 0.33
PRRX1P54821 AP001160.3-201ENST00000601484 763 ntBASIC17.12■□□□□ 0.33
PRRX1P54821 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.12■□□□□ 0.33
PRRX1P54821 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.12■□□□□ 0.33
PRRX1P54821 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRRX1P54821 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.11■□□□□ 0.33
PRRX1P54821 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRRX1P54821 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRRX1P54821 MIR935-201ENST00000401179 91 ntBASIC17.11■□□□□ 0.33
PRRX1P54821 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRRX1P54821 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.11■□□□□ 0.33
PRRX1P54821 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.11■□□□□ 0.33
PRRX1P54821 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRRX1P54821 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRRX1P54821 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.11■□□□□ 0.33
PRRX1P54821 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRRX1P54821 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRRX1P54821 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.11■□□□□ 0.33
PRRX1P54821 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.11■□□□□ 0.33
PRRX1P54821 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.11■□□□□ 0.33
PRRX1P54821 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRRX1P54821 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PRRX1P54821 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRRX1P54821 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRRX1P54821 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.1■□□□□ 0.33
PRRX1P54821 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.1■□□□□ 0.33
PRRX1P54821 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms