Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
CDR1P51861 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.69■■□□□ 1.22
CDR1P51861 KRT19P1-201ENST00000405746 1186 ntBASIC22.69■■□□□ 1.22
CDR1P51861 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.69■■□□□ 1.22
CDR1P51861 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.69■■□□□ 1.22
CDR1P51861 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDR1P51861 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDR1P51861 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CDR1P51861 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 AP006587.3-201ENST00000525742 1516 ntBASIC22.68■■□□□ 1.22
CDR1P51861 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDR1P51861 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.68■■□□□ 1.22
CDR1P51861 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.68■■□□□ 1.22
CDR1P51861 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.68■■□□□ 1.22
CDR1P51861 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDR1P51861 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.67■■□□□ 1.22
CDR1P51861 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.67■■□□□ 1.22
CDR1P51861 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 CDCA4P2-201ENST00000441182 718 ntBASIC22.67■■□□□ 1.22
CDR1P51861 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.67■■□□□ 1.22
CDR1P51861 AC073111.5-205ENST00000641717 521 ntBASIC22.67■■□□□ 1.22
CDR1P51861 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.67■■□□□ 1.22
CDR1P51861 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDR1P51861 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CDR1P51861 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.66■■□□□ 1.22
CDR1P51861 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CDR1P51861 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.66■■□□□ 1.22
CDR1P51861 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.66■■□□□ 1.22
CDR1P51861 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.66■■□□□ 1.22
CDR1P51861 UBE2DNL-204ENST00000602536 740 ntBASIC22.66■■□□□ 1.22
CDR1P51861 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.66■■□□□ 1.22
CDR1P51861 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.66■■□□□ 1.22
CDR1P51861 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.66■■□□□ 1.22
CDR1P51861 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDR1P51861 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.65■■□□□ 1.22
CDR1P51861 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.65■■□□□ 1.22
CDR1P51861 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.65■■□□□ 1.22
CDR1P51861 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
CDR1P51861 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CDR1P51861 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.65■■□□□ 1.22
CDR1P51861 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CDR1P51861 AC138932.1-201ENST00000534164 6830 ntBASIC22.65■■□□□ 1.22
CDR1P51861 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDR1P51861 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDR1P51861 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDR1P51861 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDR1P51861 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDR1P51861 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDR1P51861 AP001160.3-201ENST00000601484 763 ntBASIC22.64■■□□□ 1.21
CDR1P51861 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDR1P51861 FBXW4P1-201ENST00000426721 2239 ntBASIC22.63■■□□□ 1.21
CDR1P51861 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.63■■□□□ 1.21
CDR1P51861 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDR1P51861 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.63■■□□□ 1.21
CDR1P51861 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms