Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.81■□□□□ 0.6
CENPAP49450 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.81■□□□□ 0.6
CENPAP49450 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.81■□□□□ 0.6
CENPAP49450 AC106739.1-201ENST00000617035 715 ntBASIC18.81■□□□□ 0.6
CENPAP49450 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 AC105233.4-201ENST00000642045 216 ntBASIC18.81■□□□□ 0.6
CENPAP49450 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
CENPAP49450 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CENPAP49450 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CENPAP49450 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CENPAP49450 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CENPAP49450 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.81■□□□□ 0.6
CENPAP49450 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CENPAP49450 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CENPAP49450 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.8■□□□□ 0.6
CENPAP49450 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.8■□□□□ 0.6
CENPAP49450 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.8■□□□□ 0.6
CENPAP49450 AC133561.4-201ENST00000566112 224 ntBASIC18.8■□□□□ 0.6
CENPAP49450 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.8■□□□□ 0.6
CENPAP49450 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.8■□□□□ 0.6
CENPAP49450 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.8■□□□□ 0.6
CENPAP49450 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CENPAP49450 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CENPAP49450 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.79■□□□□ 0.6
CENPAP49450 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPAP49450 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.79■□□□□ 0.6
CENPAP49450 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CENPAP49450 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
CENPAP49450 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CENPAP49450 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPAP49450 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPAP49450 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CENPAP49450 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPAP49450 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPAP49450 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.78■□□□□ 0.6
CENPAP49450 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPAP49450 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPAP49450 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPAP49450 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPAP49450 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPAP49450 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CENPAP49450 AC009237.3-201ENST00000393279 1427 ntBASIC18.77■□□□□ 0.6
CENPAP49450 EDA-201ENST00000338901 1233 ntBASIC18.77■□□□□ 0.6
CENPAP49450 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPAP49450 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPAP49450 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 AF213884.3-201ENST00000563833 479 ntBASIC18.77■□□□□ 0.6
CENPAP49450 AC110285.6-201ENST00000617652 491 ntBASIC18.77■□□□□ 0.6
CENPAP49450 AL355001.2-201ENST00000620617 1191 ntBASIC18.77■□□□□ 0.6
CENPAP49450 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.77■□□□□ 0.6
CENPAP49450 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CENPAP49450 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 AL049796.1-201ENST00000565336 1766 ntBASIC18.77■□□□□ 0.6
CENPAP49450 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CENPAP49450 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPAP49450 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.77■□□□□ 0.59
CENPAP49450 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CENPAP49450 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.77■□□□□ 0.59
CENPAP49450 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 AP001330.3-201ENST00000520123 633 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms