Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDC34P49427 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.42■□□□□ 0.22
CDC34P49427 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDC34P49427 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC34P49427 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 AC103724.3-201ENST00000564481 992 ntBASIC16.42■□□□□ 0.22
CDC34P49427 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC34P49427 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC34P49427 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC34P49427 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC34P49427 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC34P49427 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDC34P49427 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC34P49427 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDC34P49427 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 AC020907.5-201ENST00000624372 1936 ntBASIC16.41■□□□□ 0.22
CDC34P49427 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDC34P49427 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 YBX1P4-201ENST00000392794 808 ntBASIC16.41■□□□□ 0.22
CDC34P49427 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC34P49427 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC34P49427 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDC34P49427 ABHD17AP5-201ENST00000580133 923 ntBASIC16.41■□□□□ 0.22
CDC34P49427 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDC34P49427 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC34P49427 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC34P49427 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDC34P49427 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC34P49427 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC34P49427 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC34P49427 AC133637.1-201ENST00000624115 1537 ntBASIC16.4■□□□□ 0.22
CDC34P49427 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDC34P49427 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC34P49427 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC34P49427 AL451085.2-201ENST00000605085 799 ntBASIC16.4■□□□□ 0.22
CDC34P49427 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CDC34P49427 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CDC34P49427 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC34P49427 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.39■□□□□ 0.22
CDC34P49427 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDC34P49427 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC34P49427 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDC34P49427 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDC34P49427 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC34P49427 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDC34P49427 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDC34P49427 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC34P49427 TSPY13P-201ENST00000338964 914 ntBASIC16.39■□□□□ 0.21
CDC34P49427 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDC34P49427 BX664725.1-201ENST00000438252 379 ntBASIC16.39■□□□□ 0.21
CDC34P49427 HSD17B1P1-201ENST00000590052 955 ntBASIC16.39■□□□□ 0.21
CDC34P49427 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms