Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
SLC1A6P48664 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SLC1A6P48664 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC1A6P48664 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC1A6P48664 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A6P48664 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A6P48664 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC1A6P48664 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SLC1A6P48664 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SLC1A6P48664 SMUG1P1-201ENST00000590640 811 ntBASIC20.47■□□□□ 0.87
SLC1A6P48664 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC1A6P48664 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A6P48664 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A6P48664 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC1A6P48664 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC1A6P48664 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
SLC1A6P48664 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 AC011298.3-201ENST00000615796 283 ntBASIC20.46■□□□□ 0.87
SLC1A6P48664 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A6P48664 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A6P48664 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SLC1A6P48664 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
SLC1A6P48664 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
SLC1A6P48664 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A6P48664 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC1A6P48664 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
SLC1A6P48664 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.45■□□□□ 0.86
SLC1A6P48664 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SLC1A6P48664 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A6P48664 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC1A6P48664 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A6P48664 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A6P48664 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A6P48664 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A6P48664 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SLC1A6P48664 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A6P48664 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A6P48664 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A6P48664 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A6P48664 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC1A6P48664 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 GUSBP5-201ENST00000418136 578 ntBASIC20.43■□□□□ 0.86
SLC1A6P48664 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC1A6P48664 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms