Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.76■■□□□ 1.39
HTTP42858 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.75■■□□□ 1.39
HTTP42858 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.75■■□□□ 1.39
HTTP42858 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.75■■□□□ 1.39
HTTP42858 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.75■■□□□ 1.39
HTTP42858 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.75■■□□□ 1.39
HTTP42858 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 AC133681.1-201ENST00000465482 601 ntBASIC23.75■■□□□ 1.39
HTTP42858 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTTP42858 AL034346.1-201ENST00000568244 1277 ntBASIC23.75■■□□□ 1.39
HTTP42858 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.75■■□□□ 1.39
HTTP42858 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
HTTP42858 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.74■■□□□ 1.39
HTTP42858 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTTP42858 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.74■■□□□ 1.39
HTTP42858 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.74■■□□□ 1.39
HTTP42858 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTTP42858 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.74■■□□□ 1.39
HTTP42858 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTTP42858 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTTP42858 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTTP42858 AC239809.2-201ENST00000415381 517 ntBASIC23.73■■□□□ 1.39
HTTP42858 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.73■■□□□ 1.39
HTTP42858 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
HTTP42858 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.73■■□□□ 1.39
HTTP42858 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.73■■□□□ 1.39
HTTP42858 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
HTTP42858 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.73■■□□□ 1.39
HTTP42858 AL023875.1-201ENST00000640777 796 ntBASIC23.73■■□□□ 1.39
HTTP42858 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
HTTP42858 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
HTTP42858 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
HTTP42858 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
HTTP42858 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTTP42858 AC120498.10-201ENST00000621827 505 ntBASIC23.73■■□□□ 1.39
HTTP42858 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.72■■□□□ 1.39
HTTP42858 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.72■■□□□ 1.39
HTTP42858 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
HTTP42858 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTTP42858 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.72■■□□□ 1.39
HTTP42858 AL049597.2-201ENST00000565575 961 ntBASIC23.72■■□□□ 1.39
HTTP42858 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.72■■□□□ 1.39
HTTP42858 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.72■■□□□ 1.39
HTTP42858 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
HTTP42858 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HTTP42858 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HTTP42858 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HTTP42858 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.71■■□□□ 1.39
HTTP42858 AL135905.2-201ENST00000584934 1404 ntBASIC23.71■■□□□ 1.39
HTTP42858 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HTTP42858 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.71■■□□□ 1.39
HTTP42858 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HTTP42858 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.71■■□□□ 1.39
HTTP42858 ANOS2P-203ENST00000472227 1816 ntBASIC23.71■■□□□ 1.39
HTTP42858 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
HTTP42858 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.7■■□□□ 1.38
HTTP42858 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HTTP42858 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HTTP42858 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HTTP42858 AP003071.4-201ENST00000562276 1284 ntBASIC23.7■■□□□ 1.38
HTTP42858 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.7■■□□□ 1.38
HTTP42858 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
HTTP42858 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTTP42858 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTTP42858 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTTP42858 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.69■■□□□ 1.38
HTTP42858 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.69■■□□□ 1.38
HTTP42858 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
HTTP42858 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.68■■□□□ 1.38
HTTP42858 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
HTTP42858 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.68■■□□□ 1.38
HTTP42858 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HTTP42858 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.68■■□□□ 1.38
HTTP42858 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
HTTP42858 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
HTTP42858 AC113410.3-201ENST00000623366 203 ntBASIC23.68■■□□□ 1.38
HTTP42858 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
HTTP42858 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms