Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL5P42830 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL5P42830 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14□□□□□ -0.17
CXCL5P42830 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL5P42830 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL5P42830 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL5P42830 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL5P42830 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CXCL5P42830 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CXCL5P42830 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL5P42830 UNC93B8-201ENST00000511903 705 ntBASIC13.99□□□□□ -0.17
CXCL5P42830 AP005435.1-201ENST00000529293 1178 ntBASIC13.99□□□□□ -0.17
CXCL5P42830 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL5P42830 AL138724.1-201ENST00000606771 1088 ntBASIC13.99□□□□□ -0.17
CXCL5P42830 AL020996.1-203ENST00000536896 2307 ntBASIC13.99□□□□□ -0.17
CXCL5P42830 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL5P42830 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL5P42830 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL5P42830 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 AC006128.1-201ENST00000624704 1661 ntBASIC13.98□□□□□ -0.17
CXCL5P42830 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 AL157384.1-201ENST00000445995 2473 ntBASIC13.98□□□□□ -0.17
CXCL5P42830 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CXCL5P42830 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 GABARAPL3-202ENST00000624044 1851 ntBASIC13.98□□□□□ -0.17
CXCL5P42830 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.98□□□□□ -0.17
CXCL5P42830 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 AP006587.3-201ENST00000525742 1516 ntBASIC13.98□□□□□ -0.17
CXCL5P42830 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL5P42830 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL5P42830 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CXCL5P42830 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CXCL5P42830 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CXCL5P42830 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CXCL5P42830 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.97□□□□□ -0.17
CXCL5P42830 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCL5P42830 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCL5P42830 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CXCL5P42830 DUX4L19-201ENST00000557448 1267 ntBASIC13.97□□□□□ -0.17
CXCL5P42830 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.97□□□□□ -0.17
CXCL5P42830 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCL5P42830 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCL5P42830 LINC01006-201ENST00000333319 2292 ntBASIC13.97□□□□□ -0.17
CXCL5P42830 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms