Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
SCNN1AP37088 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 AC016769.1-201ENST00000409132 1010 ntBASIC21.76■■□□□ 1.07
SCNN1AP37088 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SCNN1AP37088 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.76■■□□□ 1.07
SCNN1AP37088 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.76■■□□□ 1.07
SCNN1AP37088 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.76■■□□□ 1.07
SCNN1AP37088 AC022517.1-201ENST00000592429 346 ntBASIC21.76■■□□□ 1.07
SCNN1AP37088 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 AC010536.3-201ENST00000620306 533 ntBASIC21.76■■□□□ 1.07
SCNN1AP37088 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SCNN1AP37088 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCNN1AP37088 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SCNN1AP37088 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.75■■□□□ 1.07
SCNN1AP37088 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.75■■□□□ 1.07
SCNN1AP37088 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.75■■□□□ 1.07
SCNN1AP37088 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCNN1AP37088 MFSD11-216ENST00000590393 1141 ntBASIC21.75■■□□□ 1.07
SCNN1AP37088 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.75■■□□□ 1.07
SCNN1AP37088 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCNN1AP37088 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.74■■□□□ 1.07
SCNN1AP37088 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCNN1AP37088 AC091799.1-201ENST00000422823 811 ntBASIC21.74■■□□□ 1.07
SCNN1AP37088 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.74■■□□□ 1.07
SCNN1AP37088 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.74■■□□□ 1.07
SCNN1AP37088 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
SCNN1AP37088 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.74■■□□□ 1.07
SCNN1AP37088 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCNN1AP37088 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCNN1AP37088 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SCNN1AP37088 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.73■■□□□ 1.07
SCNN1AP37088 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.73■■□□□ 1.07
SCNN1AP37088 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 TERF1P5-201ENST00000477545 1207 ntBASIC21.73■■□□□ 1.07
SCNN1AP37088 AC007322.4-201ENST00000509611 723 ntBASIC21.73■■□□□ 1.07
SCNN1AP37088 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 AC011484.1-201ENST00000377652 1995 ntBASIC21.73■■□□□ 1.07
SCNN1AP37088 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.73■■□□□ 1.07
SCNN1AP37088 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCNN1AP37088 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCNN1AP37088 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SCNN1AP37088 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCNN1AP37088 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.72■■□□□ 1.07
SCNN1AP37088 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCNN1AP37088 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCNN1AP37088 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCNN1AP37088 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.72■■□□□ 1.07
SCNN1AP37088 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.72■■□□□ 1.07
SCNN1AP37088 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCNN1AP37088 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.72■■□□□ 1.07
SCNN1AP37088 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
SCNN1AP37088 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SCNN1AP37088 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.72■■□□□ 1.07
SCNN1AP37088 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SCNN1AP37088 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SCNN1AP37088 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 AL137060.1-201ENST00000618151 2648 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 AL162412.1-201ENST00000567129 965 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.71■■□□□ 1.07
SCNN1AP37088 AC013268.1-206ENST00000638368 961 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 AC112229.1-201ENST00000639295 961 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 AC121338.2-201ENST00000622535 1744 ntBASIC21.71■■□□□ 1.07
SCNN1AP37088 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCNN1AP37088 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.7■■□□□ 1.06
SCNN1AP37088 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SCNN1AP37088 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms