Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFC4P35249 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RFC4P35249 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFC4P35249 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.41■■□□□ 1.82
RFC4P35249 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFC4P35249 LINC01023-201ENST00000606054 436 ntBASIC26.41■■□□□ 1.82
RFC4P35249 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.41■■□□□ 1.82
RFC4P35249 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.4■■□□□ 1.82
RFC4P35249 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 POM121L13P-201ENST00000422362 380 ntBASIC26.4■■□□□ 1.82
RFC4P35249 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RFC4P35249 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 C11orf96-202ENST00000528572 1834 ntBASIC26.39■■□□□ 1.82
RFC4P35249 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 AC007322.3-201ENST00000426526 701 ntBASIC26.39■■□□□ 1.82
RFC4P35249 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFC4P35249 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.39■■□□□ 1.82
RFC4P35249 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RFC4P35249 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.39■■□□□ 1.81
RFC4P35249 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.38■■□□□ 1.81
RFC4P35249 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
RFC4P35249 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.38■■□□□ 1.81
RFC4P35249 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.38■■□□□ 1.81
RFC4P35249 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.38■■□□□ 1.81
RFC4P35249 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.38■■□□□ 1.81
RFC4P35249 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.38■■□□□ 1.81
RFC4P35249 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RFC4P35249 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.38■■□□□ 1.81
RFC4P35249 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.37■■□□□ 1.81
RFC4P35249 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFC4P35249 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.37■■□□□ 1.81
RFC4P35249 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.37■■□□□ 1.81
RFC4P35249 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 AC010331.1-201ENST00000611423 582 ntBASIC26.37■■□□□ 1.81
RFC4P35249 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RFC4P35249 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.37■■□□□ 1.81
RFC4P35249 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFC4P35249 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RFC4P35249 AC092053.2-201ENST00000640557 1818 ntBASIC26.37■■□□□ 1.81
RFC4P35249 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFC4P35249 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.37■■□□□ 1.81
RFC4P35249 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.36■■□□□ 1.81
RFC4P35249 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.36■■□□□ 1.81
RFC4P35249 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 AC093323.1-202ENST00000635031 2045 ntBASIC26.36■■□□□ 1.81
RFC4P35249 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RFC4P35249 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.36■■□□□ 1.81
RFC4P35249 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RFC4P35249 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFC4P35249 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
RFC4P35249 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.35■■□□□ 1.81
RFC4P35249 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.35■■□□□ 1.81
RFC4P35249 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RFC4P35249 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RFC4P35249 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.35■■□□□ 1.81
RFC4P35249 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.35■■□□□ 1.81
RFC4P35249 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.35■■□□□ 1.81
RFC4P35249 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.35■■□□□ 1.81
RFC4P35249 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFC4P35249 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFC4P35249 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFC4P35249 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.34■■□□□ 1.81
RFC4P35249 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFC4P35249 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFC4P35249 AC012618.2-201ENST00000428058 849 ntBASIC26.34■■□□□ 1.81
RFC4P35249 BX088651.1-201ENST00000540551 451 ntBASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms