Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 EGT2YNL327W 3126 nt4.15□□□□□ -1.75 RIP-Chip
PUB1P32588 YCR050CYCR050C 309 nt4.14□□□□□ -1.75
PUB1P32588 GPI8YDR331W 1236 nt4.14□□□□□ -1.75 RIP-Chip
PUB1P32588 YHL034W-AYHL034W-A 462 nt4.14□□□□□ -1.75
PUB1P32588 YAL047W-AYAL047W-A 330 nt4.14□□□□□ -1.75
PUB1P32588 PAM18YLR008C 507 nt4.14□□□□□ -1.75
PUB1P32588 YOR022CYOR022C 2148 nt4.14□□□□□ -1.75
PUB1P32588 TSC3YBR058C-A 243 nt4.14□□□□□ -1.75
PUB1P32588 HIR2YOR038C 2628 nt4.14□□□□□ -1.75
PUB1P32588 PUB1YNL016W 1362 nt4.14□□□□□ -1.75
PUB1P32588 CTT1YGR088W 1689 nt4.13□□□□□ -1.75
PUB1P32588 RPP1AYDL081C 321 nt4.13□□□□□ -1.75 RIP-Chip
PUB1P32588 THI13YDL244W 1023 nt4.13□□□□□ -1.75
PUB1P32588 BCP1YDR361C 852 nt4.13□□□□□ -1.75
PUB1P32588 YPS5YGL259W 498 nt4.13□□□□□ -1.75
PUB1P32588 YHR214C-EYHR214C-E 300 nt4.13□□□□□ -1.75
PUB1P32588 PGA1YNL158W 597 nt4.13□□□□□ -1.75 RIP-Chip
PUB1P32588 IDH2YOR136W 1110 nt4.13□□□□□ -1.75 RIP-Chip
PUB1P32588 ARN2YHL047C 1863 nt4.13□□□□□ -1.75 RIP-Chip
PUB1P32588 TOM70YNL121C 1854 nt4.13□□□□□ -1.75
PUB1P32588 RAD52YML032C 1416 nt4.12□□□□□ -1.75
PUB1P32588 SAP4YGL229C 2457 nt4.12□□□□□ -1.75
PUB1P32588 MKT1YNL085W 2493 nt4.12□□□□□ -1.75
PUB1P32588 RPC11YDR045C 333 nt4.12□□□□□ -1.75
PUB1P32588 MSL1YIR009W 336 nt4.12□□□□□ -1.75
PUB1P32588 TRF5YNL299W 1929 nt4.12□□□□□ -1.75
PUB1P32588 RNH70YGR276C 1662 nt4.12□□□□□ -1.75
PUB1P32588 YDR261C-DYDR261C-D 4815 nt4.11□□□□□ -1.75
PUB1P32588 PEX30YLR324W 1572 nt4.11□□□□□ -1.75
PUB1P32588 GAS3YMR215W 1575 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 MET4YNL103W 2019 nt4.11□□□□□ -1.75
PUB1P32588 MDR1YGR100W 2853 nt4.11□□□□□ -1.75
PUB1P32588 YTA12YMR089C 2478 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 snR7-SsnR7-S 179 nt4.11□□□□□ -1.75
PUB1P32588 SUR2YDR297W 1050 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 MFA1YDR461W 111 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 SNA2YDR525W-A 240 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 SLX8YER116C 825 nt4.11□□□□□ -1.75
PUB1P32588 YJL086CYJL086C 369 nt4.11□□□□□ -1.75
PUB1P32588 JIP3YLR331C 378 nt4.11□□□□□ -1.75
PUB1P32588 YKU70YMR284W 1809 nt4.11□□□□□ -1.75
PUB1P32588 SWP82YFL049W 1872 nt4.11□□□□□ -1.75
PUB1P32588 YBP1YBR216C 2025 nt4.11□□□□□ -1.75
PUB1P32588 OLE1YGL055W 1533 nt4.11□□□□□ -1.75 RIP-Chip
PUB1P32588 HRK1YOR267C 2280 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 APP1YNL094W 1764 nt4.1□□□□□ -1.75
PUB1P32588 LAS21YJL062W 2493 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 SKN7YHR206W 1869 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 OPI6YDL096C 327 nt4.1□□□□□ -1.75
PUB1P32588 YHL026CYHL026C 948 nt4.1□□□□□ -1.75
PUB1P32588 YHR139C-AYHR139C-A 312 nt4.1□□□□□ -1.75
PUB1P32588 YHR193C-AYHR193C-A 375 nt4.1□□□□□ -1.75
PUB1P32588 SDH2YLL041C 801 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 ARP7YPR034W 1434 nt4.1□□□□□ -1.75
PUB1P32588 MSC2YDR205W 2175 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 DIE2YGR227W 1578 nt4.1□□□□□ -1.75 RIP-Chip
PUB1P32588 TOS3YGL179C 1683 nt4.1□□□□□ -1.75
PUB1P32588 DBF20YPR111W 1695 nt4.1□□□□□ -1.75
PUB1P32588 ASK10YGR097W 3441 nt4.09□□□□□ -1.75 RIP-Chip
PUB1P32588 SNF3YDL194W 2655 nt4.09□□□□□ -1.75
PUB1P32588 PPZ1YML016C 2079 nt4.09□□□□□ -1.75 RIP-Chip
PUB1P32588 DSL1YNL258C 2265 nt4.09□□□□□ -1.75 RIP-Chip
PUB1P32588 SLK19YOR195W 2466 nt4.09□□□□□ -1.75
PUB1P32588 YCR045W-AYCR045W-A 351 nt4.09□□□□□ -1.75
PUB1P32588 RPL34AYER056C-A 366 nt4.09□□□□□ -1.75
PUB1P32588 YLR076CYLR076C 423 nt4.09□□□□□ -1.75
PUB1P32588 FBP1YLR377C 1047 nt4.09□□□□□ -1.75
PUB1P32588 snR49snR49 165 nt4.09□□□□□ -1.75
PUB1P32588 MDM36YPR083W 1740 nt4.09□□□□□ -1.76
PUB1P32588 VPS52YDR484W 1926 nt4.09□□□□□ -1.76
PUB1P32588 AFT1YGL071W 2073 nt4.09□□□□□ -1.76
PUB1P32588 YDL211CYDL211C 1119 nt4.08□□□□□ -1.76
PUB1P32588 DBF2YGR092W 1719 nt4.08□□□□□ -1.76
PUB1P32588 BIO2YGR286C 1128 nt4.08□□□□□ -1.76 RIP-Chip
PUB1P32588 PEP5YMR231W 3090 nt4.08□□□□□ -1.76
PUB1P32588 DIB1YPR082C 432 nt4.08□□□□□ -1.76
PUB1P32588 REI1YBR267W 1182 nt4.08□□□□□ -1.76
PUB1P32588 GPR1YDL035C 2886 nt4.08□□□□□ -1.76
PUB1P32588 APC1YNL172W 5247 nt4.08□□□□□ -1.76
PUB1P32588 SWC3YAL011W 1878 nt4.07□□□□□ -1.76
PUB1P32588 PCK1YKR097W 1650 nt4.07□□□□□ -1.76
PUB1P32588 CBF5YLR175W 1452 nt4.07□□□□□ -1.76
PUB1P32588 ATG21YPL100W 1491 nt4.07□□□□□ -1.76
PUB1P32588 VPS9YML097C 1356 nt4.07□□□□□ -1.76
PUB1P32588 HMF1YER057C 390 nt4.07□□□□□ -1.76
PUB1P32588 ECT1YGR007W 972 nt4.07□□□□□ -1.76
PUB1P32588 YJL135WYJL135W 318 nt4.07□□□□□ -1.76
PUB1P32588 YLR458WYLR458W 381 nt4.07□□□□□ -1.76
PUB1P32588 YBL109WYBL109W 336 nt4.07□□□□□ -1.76
PUB1P32588 YPL039WYPL039W 951 nt4.07□□□□□ -1.76 RIP-Chip
PUB1P32588 DPB3YBR278W 606 nt4.07□□□□□ -1.76
PUB1P32588 POL12YBL035C 2118 nt4.07□□□□□ -1.76
PUB1P32588 SAC1YKL212W 1872 nt4.07□□□□□ -1.76 RIP-Chip
PUB1P32588 VPS45YGL095C 1734 nt4.07□□□□□ -1.76
PUB1P32588 VHC1YBR235W 3363 nt4.06□□□□□ -1.76 RIP-Chip
PUB1P32588 SNA4YDL123W 423 nt4.06□□□□□ -1.76 RIP-Chip
PUB1P32588 YDL185C-AYDL185C-A 228 nt4.06□□□□□ -1.76
PUB1P32588 YDR169C-AYDR169C-A 150 nt4.06□□□□□ -1.76
PUB1P32588 CAX4YGR036C 720 nt4.06□□□□□ -1.76 RIP-Chip
PUB1P32588 YIL012WYIL012W 342 nt4.06□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms