Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.42■□□□□ 0.86
VARSP26640 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.42■□□□□ 0.86
VARSP26640 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VARSP26640 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.41■□□□□ 0.86
VARSP26640 AC004911.1-201ENST00000416316 871 ntBASIC20.41■□□□□ 0.86
VARSP26640 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.41■□□□□ 0.86
VARSP26640 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.41■□□□□ 0.86
VARSP26640 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.41■□□□□ 0.86
VARSP26640 AC092437.1-201ENST00000624794 1048 ntBASIC20.41■□□□□ 0.86
VARSP26640 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.41■□□□□ 0.86
VARSP26640 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.41■□□□□ 0.86
VARSP26640 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 LINC02228-203ENST00000641970 1355 ntBASIC20.41■□□□□ 0.86
VARSP26640 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARSP26640 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VARSP26640 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.4■□□□□ 0.86
VARSP26640 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VARSP26640 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.4■□□□□ 0.86
VARSP26640 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.4■□□□□ 0.86
VARSP26640 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.4■□□□□ 0.86
VARSP26640 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VARSP26640 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARSP26640 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARSP26640 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VARSP26640 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VARSP26640 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.39■□□□□ 0.85
VARSP26640 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARSP26640 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
VARSP26640 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.39■□□□□ 0.85
VARSP26640 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.39■□□□□ 0.85
VARSP26640 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.39■□□□□ 0.85
VARSP26640 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VARSP26640 NTF6G-201ENST00000591094 616 ntBASIC20.39■□□□□ 0.85
VARSP26640 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.39■□□□□ 0.85
VARSP26640 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.39■□□□□ 0.85
VARSP26640 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARSP26640 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.39■□□□□ 0.85
VARSP26640 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VARSP26640 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARSP26640 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.38■□□□□ 0.85
VARSP26640 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
VARSP26640 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
VARSP26640 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.38■□□□□ 0.85
VARSP26640 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.38■□□□□ 0.85
VARSP26640 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.38■□□□□ 0.85
VARSP26640 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.38■□□□□ 0.85
VARSP26640 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.38■□□□□ 0.85
VARSP26640 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.38■□□□□ 0.85
VARSP26640 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VARSP26640 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.38■□□□□ 0.85
VARSP26640 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARSP26640 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
VARSP26640 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
VARSP26640 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
VARSP26640 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.37■□□□□ 0.85
VARSP26640 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
VARSP26640 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VARSP26640 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.37■□□□□ 0.85
VARSP26640 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms