Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.63■□□□□ 0.41
COL8A2P25067 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL8A2P25067 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.63■□□□□ 0.41
COL8A2P25067 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.63■□□□□ 0.41
COL8A2P25067 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL8A2P25067 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.63■□□□□ 0.41
COL8A2P25067 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.63■□□□□ 0.41
COL8A2P25067 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 ECEL1P1-201ENST00000373592 1742 ntBASIC17.63■□□□□ 0.41
COL8A2P25067 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.63■□□□□ 0.41
COL8A2P25067 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL8A2P25067 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.62■□□□□ 0.41
COL8A2P25067 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL8A2P25067 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.62■□□□□ 0.41
COL8A2P25067 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.62■□□□□ 0.41
COL8A2P25067 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.62■□□□□ 0.41
COL8A2P25067 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.62■□□□□ 0.41
COL8A2P25067 AC142086.2-201ENST00000569753 217 ntBASIC17.62■□□□□ 0.41
COL8A2P25067 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.62■□□□□ 0.41
COL8A2P25067 AC008694.1-202ENST00000636953 945 ntBASIC17.62■□□□□ 0.41
COL8A2P25067 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL8A2P25067 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL8A2P25067 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
COL8A2P25067 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COL8A2P25067 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.61■□□□□ 0.41
COL8A2P25067 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.61■□□□□ 0.41
COL8A2P25067 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.61■□□□□ 0.41
COL8A2P25067 AL591742.1-201ENST00000604433 565 ntBASIC17.61■□□□□ 0.41
COL8A2P25067 AC243732.1-201ENST00000612648 864 ntBASIC17.61■□□□□ 0.41
COL8A2P25067 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.61■□□□□ 0.41
COL8A2P25067 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL8A2P25067 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL8A2P25067 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
COL8A2P25067 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.6■□□□□ 0.41
COL8A2P25067 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.6■□□□□ 0.41
COL8A2P25067 AC093787.1-201ENST00000450396 207 ntBASIC17.6■□□□□ 0.41
COL8A2P25067 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.6■□□□□ 0.41
COL8A2P25067 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
COL8A2P25067 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 AC069236.1-201ENST00000604339 616 ntBASIC17.6■□□□□ 0.41
COL8A2P25067 AC016405.3-201ENST00000607710 860 ntBASIC17.6■□□□□ 0.41
COL8A2P25067 OR10C1-204ENST00000622521 1039 ntBASIC17.6■□□□□ 0.41
COL8A2P25067 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.6■□□□□ 0.41
COL8A2P25067 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.6■□□□□ 0.41
COL8A2P25067 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.6■□□□□ 0.41
COL8A2P25067 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COL8A2P25067 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.6■□□□□ 0.41
COL8A2P25067 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL8A2P25067 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL8A2P25067 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.59■□□□□ 0.41
COL8A2P25067 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL8A2P25067 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.59■□□□□ 0.41
COL8A2P25067 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COL8A2P25067 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.59■□□□□ 0.41
COL8A2P25067 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.59■□□□□ 0.41
COL8A2P25067 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL8A2P25067 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms