Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
APCP25054 NTF6B-201ENST00000591913 560 ntBASIC17.81■□□□□ 0.44
APCP25054 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.81■□□□□ 0.44
APCP25054 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.81■□□□□ 0.44
APCP25054 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
APCP25054 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.8■□□□□ 0.44
APCP25054 AC113347.1-201ENST00000413321 391 ntBASIC17.8■□□□□ 0.44
APCP25054 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
APCP25054 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.8■□□□□ 0.44
APCP25054 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.8■□□□□ 0.44
APCP25054 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.8■□□□□ 0.44
APCP25054 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.8■□□□□ 0.44
APCP25054 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.8■□□□□ 0.44
APCP25054 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APCP25054 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
APCP25054 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APCP25054 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APCP25054 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APCP25054 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APCP25054 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APCP25054 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.8■□□□□ 0.44
APCP25054 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.8■□□□□ 0.44
APCP25054 AC026471.5-201ENST00000615068 467 ntBASIC17.8■□□□□ 0.44
APCP25054 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.79■□□□□ 0.44
APCP25054 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.79■□□□□ 0.44
APCP25054 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.79■□□□□ 0.44
APCP25054 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APCP25054 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.79■□□□□ 0.44
APCP25054 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.79■□□□□ 0.44
APCP25054 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.79■□□□□ 0.44
APCP25054 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APCP25054 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
APCP25054 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.78■□□□□ 0.44
APCP25054 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.78■□□□□ 0.44
APCP25054 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 AC008175.2-201ENST00000612840 297 ntBASIC17.78■□□□□ 0.44
APCP25054 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
APCP25054 KRT18P57-201ENST00000443599 1254 ntBASIC17.78■□□□□ 0.44
APCP25054 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.78■□□□□ 0.44
APCP25054 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
APCP25054 AC113410.3-201ENST00000623366 203 ntBASIC17.78■□□□□ 0.44
APCP25054 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.78■□□□□ 0.44
APCP25054 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APCP25054 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.77■□□□□ 0.44
APCP25054 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APCP25054 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APCP25054 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.77■□□□□ 0.44
APCP25054 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
APCP25054 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.77■□□□□ 0.44
APCP25054 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APCP25054 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
APCP25054 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APCP25054 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
APCP25054 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.77■□□□□ 0.43
APCP25054 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
APCP25054 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.76■□□□□ 0.43
APCP25054 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
APCP25054 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APCP25054 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
APCP25054 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APCP25054 MCRIP2P1-201ENST00000394346 511 ntBASIC17.76■□□□□ 0.43
APCP25054 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.76■□□□□ 0.43
APCP25054 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
APCP25054 KRT8P9-201ENST00000558927 1449 ntBASIC17.76■□□□□ 0.43
APCP25054 UPK3BP1-201ENST00000428678 509 ntBASIC17.76■□□□□ 0.43
APCP25054 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.76■□□□□ 0.43
APCP25054 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.76■□□□□ 0.43
APCP25054 AC079089.2-201ENST00000531211 1277 ntBASIC17.76■□□□□ 0.43
APCP25054 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.76■□□□□ 0.43
APCP25054 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.75■□□□□ 0.43
APCP25054 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
APCP25054 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.75■□□□□ 0.43
APCP25054 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.75■□□□□ 0.43
APCP25054 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
APCP25054 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
APCP25054 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms