Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.52■□□□□ 0.88
NELFEP18615 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.52■□□□□ 0.88
NELFEP18615 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.52■□□□□ 0.88
NELFEP18615 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 AC010542.4-201ENST00000563151 1910 ntBASIC20.52■□□□□ 0.88
NELFEP18615 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFEP18615 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NELFEP18615 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NELFEP18615 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NELFEP18615 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NELFEP18615 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NELFEP18615 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NELFEP18615 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.5■□□□□ 0.87
NELFEP18615 ID1-201ENST00000376105 1233 ntBASIC20.5■□□□□ 0.87
NELFEP18615 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NELFEP18615 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.5■□□□□ 0.87
NELFEP18615 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.5■□□□□ 0.87
NELFEP18615 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.5■□□□□ 0.87
NELFEP18615 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.5■□□□□ 0.87
NELFEP18615 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NELFEP18615 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NELFEP18615 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NELFEP18615 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NELFEP18615 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.49■□□□□ 0.87
NELFEP18615 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.49■□□□□ 0.87
NELFEP18615 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NELFEP18615 AC011767.1-201ENST00000617410 1153 ntBASIC20.49■□□□□ 0.87
NELFEP18615 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NELFEP18615 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NELFEP18615 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.48■□□□□ 0.87
NELFEP18615 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.48■□□□□ 0.87
NELFEP18615 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 AC026185.1-201ENST00000445748 174 ntBASIC20.48■□□□□ 0.87
NELFEP18615 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.48■□□□□ 0.87
NELFEP18615 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.48■□□□□ 0.87
NELFEP18615 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NELFEP18615 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NELFEP18615 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NELFEP18615 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.47■□□□□ 0.87
NELFEP18615 AP001160.3-201ENST00000601484 763 ntBASIC20.47■□□□□ 0.87
NELFEP18615 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 AP006587.3-201ENST00000525742 1516 ntBASIC20.47■□□□□ 0.87
NELFEP18615 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NELFEP18615 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.46■□□□□ 0.87
NELFEP18615 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.46■□□□□ 0.87
NELFEP18615 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
NELFEP18615 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NELFEP18615 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.46■□□□□ 0.87
NELFEP18615 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NELFEP18615 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NELFEP18615 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NELFEP18615 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms