Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 KRT18P24-201ENST00000344739 1156 ntBASIC21.73■■□□□ 1.07
H2AFXP16104 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
H2AFXP16104 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.73■■□□□ 1.07
H2AFXP16104 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.73■■□□□ 1.07
H2AFXP16104 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.73■■□□□ 1.07
H2AFXP16104 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 AC005332.7-201ENST00000614046 2005 ntBASIC21.73■■□□□ 1.07
H2AFXP16104 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.73■■□□□ 1.07
H2AFXP16104 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2AFXP16104 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
H2AFXP16104 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.72■■□□□ 1.07
H2AFXP16104 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2AFXP16104 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
H2AFXP16104 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
H2AFXP16104 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
H2AFXP16104 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.71■■□□□ 1.07
H2AFXP16104 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
H2AFXP16104 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.71■■□□□ 1.07
H2AFXP16104 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 AP004607.7-201ENST00000527152 1677 ntBASIC21.71■■□□□ 1.07
H2AFXP16104 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
H2AFXP16104 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2AFXP16104 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.7■■□□□ 1.06
H2AFXP16104 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 AC093503.3-201ENST00000624917 2352 ntBASIC21.7■■□□□ 1.06
H2AFXP16104 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.7■■□□□ 1.06
H2AFXP16104 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
H2AFXP16104 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
H2AFXP16104 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.7■■□□□ 1.06
H2AFXP16104 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2AFXP16104 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.69■■□□□ 1.06
H2AFXP16104 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 FP700111.2-201ENST00000619190 1892 ntBASIC21.69■■□□□ 1.06
H2AFXP16104 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.69■■□□□ 1.06
H2AFXP16104 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.69■■□□□ 1.06
H2AFXP16104 GPX1-201ENST00000419349 1106 ntBASIC21.69■■□□□ 1.06
H2AFXP16104 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.69■■□□□ 1.06
H2AFXP16104 AC005703.6-201ENST00000623265 1329 ntBASIC21.69■■□□□ 1.06
H2AFXP16104 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
H2AFXP16104 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
H2AFXP16104 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.69■■□□□ 1.06
H2AFXP16104 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2AFXP16104 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms