Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 AC010980.2-201ENST00000587099 1412 ntBASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB40ALP0C0E4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 FAM201B-201ENST00000458407 597 ntBASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB40ALP0C0E4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 AC080038.3-201ENST00000623346 1952 ntBASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 MIR4651-201ENST00000582622 73 ntBASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40ALP0C0E4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB40ALP0C0E4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.64■□□□□ 0.74
RAB40ALP0C0E4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB40ALP0C0E4 AC245052.3-201ENST00000450182 901 ntBASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 AC097658.1-201ENST00000475555 843 ntBASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40ALP0C0E4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 MYC-209ENST00000641252 345 ntBASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB40ALP0C0E4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 AC091799.1-201ENST00000422823 811 ntBASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 FAM21FP-204ENST00000608637 956 ntBASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40ALP0C0E4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40ALP0C0E4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms