Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.05■□□□□ 0.96
MMP2P08253 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
MMP2P08253 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP2P08253 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP2P08253 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP2P08253 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MMP2P08253 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MMP2P08253 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP2P08253 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.04■□□□□ 0.96
MMP2P08253 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP2P08253 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP2P08253 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MMP2P08253 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.04■□□□□ 0.96
MMP2P08253 AC092437.1-201ENST00000624794 1048 ntBASIC21.04■□□□□ 0.96
MMP2P08253 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP2P08253 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
MMP2P08253 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP2P08253 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP2P08253 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP2P08253 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP2P08253 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP2P08253 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP2P08253 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.03■□□□□ 0.96
MMP2P08253 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP2P08253 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP2P08253 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP2P08253 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP2P08253 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP2P08253 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 AC245052.3-201ENST00000450182 901 ntBASIC21.02■□□□□ 0.96
MMP2P08253 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP2P08253 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP2P08253 MFSD11-216ENST00000590393 1141 ntBASIC21.02■□□□□ 0.96
MMP2P08253 IKBKGP1-201ENST00000612193 1073 ntBASIC21.02■□□□□ 0.96
MMP2P08253 AC243732.1-201ENST00000612648 864 ntBASIC21.02■□□□□ 0.96
MMP2P08253 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MMP2P08253 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP2P08253 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MMP2P08253 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP2P08253 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.01■□□□□ 0.95
MMP2P08253 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MMP2P08253 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MMP2P08253 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP2P08253 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
MMP2P08253 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 AC016769.1-201ENST00000409132 1010 ntBASIC21.01■□□□□ 0.95
MMP2P08253 KRT18P11-201ENST00000435214 1283 ntBASIC21.01■□□□□ 0.95
MMP2P08253 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP2P08253 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP2P08253 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
MMP2P08253 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP2P08253 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP2P08253 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP2P08253 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21■□□□□ 0.95
MMP2P08253 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MMP2P08253 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 AC010536.3-201ENST00000620306 533 ntBASIC21■□□□□ 0.95
MMP2P08253 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21■□□□□ 0.95
MMP2P08253 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MMP2P08253 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP2P08253 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP2P08253 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP2P08253 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP2P08253 AC091799.1-201ENST00000422823 811 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms