Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 AC006128.1-201ENST00000624704 1661 ntBASIC18.68■□□□□ 0.58
HLA-DPB1P04440 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DPB1P04440 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.66■□□□□ 0.58
HLA-DPB1P04440 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AC073314.1-201ENST00000568729 2216 ntBASIC18.66■□□□□ 0.58
HLA-DPB1P04440 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DPB1P04440 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 AC008764.7-201ENST00000593779 1081 ntBASIC18.65■□□□□ 0.58
HLA-DPB1P04440 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DPB1P04440 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DPB1P04440 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
HLA-DPB1P04440 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.64■□□□□ 0.58
HLA-DPB1P04440 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPB1P04440 AC068587.7-201ENST00000641602 218 ntBASIC18.64■□□□□ 0.57
HLA-DPB1P04440 RNF165-205ENST00000588679 2904 ntBASIC18.64■□□□□ 0.57
HLA-DPB1P04440 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms