Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRNA1P02708 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 AP003097.1-201ENST00000530657 1135 ntBASIC22.82■■□□□ 1.24
CHRNA1P02708 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.82■■□□□ 1.24
CHRNA1P02708 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CHRNA1P02708 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.82■■□□□ 1.24
CHRNA1P02708 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRNA1P02708 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.81■■□□□ 1.24
CHRNA1P02708 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CHRNA1P02708 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.81■■□□□ 1.24
CHRNA1P02708 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.81■■□□□ 1.24
CHRNA1P02708 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.81■■□□□ 1.24
CHRNA1P02708 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.81■■□□□ 1.24
CHRNA1P02708 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.81■■□□□ 1.24
CHRNA1P02708 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
CHRNA1P02708 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHRNA1P02708 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHRNA1P02708 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHRNA1P02708 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.8■■□□□ 1.24
CHRNA1P02708 AL158047.1-201ENST00000445918 881 ntBASIC22.8■■□□□ 1.24
CHRNA1P02708 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.8■■□□□ 1.24
CHRNA1P02708 AC142381.4-202ENST00000563973 229 ntBASIC22.8■■□□□ 1.24
CHRNA1P02708 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.8■■□□□ 1.24
CHRNA1P02708 AC008403.3-201ENST00000598924 454 ntBASIC22.8■■□□□ 1.24
CHRNA1P02708 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.8■■□□□ 1.24
CHRNA1P02708 AC073648.6-201ENST00000641589 218 ntBASIC22.8■■□□□ 1.24
CHRNA1P02708 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.8■■□□□ 1.24
CHRNA1P02708 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHRNA1P02708 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHRNA1P02708 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.79■■□□□ 1.24
CHRNA1P02708 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.79■■□□□ 1.24
CHRNA1P02708 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 KRT18P68-201ENST00000392293 1000 ntBASIC22.79■■□□□ 1.24
CHRNA1P02708 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.79■■□□□ 1.24
CHRNA1P02708 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.79■■□□□ 1.24
CHRNA1P02708 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 AL589743.5-201ENST00000616611 1050 ntBASIC22.79■■□□□ 1.24
CHRNA1P02708 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHRNA1P02708 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CHRNA1P02708 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.79■■□□□ 1.24
CHRNA1P02708 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.78■■□□□ 1.24
CHRNA1P02708 AC007322.3-201ENST00000426526 701 ntBASIC22.78■■□□□ 1.24
CHRNA1P02708 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CHRNA1P02708 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 AC060766.5-201ENST00000590539 871 ntBASIC22.78■■□□□ 1.24
CHRNA1P02708 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CHRNA1P02708 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.78■■□□□ 1.24
CHRNA1P02708 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CHRNA1P02708 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHRNA1P02708 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.77■■□□□ 1.24
CHRNA1P02708 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.77■■□□□ 1.24
CHRNA1P02708 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CHRNA1P02708 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.77■■□□□ 1.24
CHRNA1P02708 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 HLA-B-256ENST00000639848 1089 ntBASIC22.77■■□□□ 1.24
CHRNA1P02708 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHRNA1P02708 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.76■■□□□ 1.23
CHRNA1P02708 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.76■■□□□ 1.23
CHRNA1P02708 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.76■■□□□ 1.23
CHRNA1P02708 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.76■■□□□ 1.23
CHRNA1P02708 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.76■■□□□ 1.23
CHRNA1P02708 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.76■■□□□ 1.23
CHRNA1P02708 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
CHRNA1P02708 AP006294.2-201ENST00000641667 209 ntBASIC22.76■■□□□ 1.23
CHRNA1P02708 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CHRNA1P02708 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHRNA1P02708 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms