Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 AC007225.1-201ENST00000566331 1836 ntBASIC18.04■□□□□ 0.48
HLA-DQB1P01920 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 Z92544.1-202ENST00000571933 1220 ntBASIC18.03■□□□□ 0.48
HLA-DQB1P01920 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQB1P01920 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.03■□□□□ 0.48
HLA-DQB1P01920 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 AP000974.1-201ENST00000623909 2387 ntBASIC18.02■□□□□ 0.48
HLA-DQB1P01920 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 KRT125P-201ENST00000546827 989 ntBASIC18.02■□□□□ 0.48
HLA-DQB1P01920 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQB1P01920 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB1P01920 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HLA-DQB1P01920 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB1P01920 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB1P01920 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQB1P01920 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQB1P01920 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 MTDHP2-201ENST00000601468 714 ntBASIC18■□□□□ 0.47
HLA-DQB1P01920 AL451085.2-201ENST00000605085 799 ntBASIC18■□□□□ 0.47
HLA-DQB1P01920 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
HLA-DQB1P01920 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQB1P01920 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQB1P01920 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQB1P01920 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms