Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUPT3HO75486 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUPT3HO75486 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUPT3HO75486 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUPT3HO75486 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SUPT3HO75486 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUPT3HO75486 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SUPT3HO75486 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.59■□□□□ 0.89
SUPT3HO75486 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
SUPT3HO75486 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SUPT3HO75486 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SUPT3HO75486 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SUPT3HO75486 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.58■□□□□ 0.89
SUPT3HO75486 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SUPT3HO75486 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SUPT3HO75486 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SUPT3HO75486 AL139246.5-201ENST00000606645 996 ntBASIC20.58■□□□□ 0.89
SUPT3HO75486 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SUPT3HO75486 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
SUPT3HO75486 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUPT3HO75486 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.58■□□□□ 0.88
SUPT3HO75486 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUPT3HO75486 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUPT3HO75486 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUPT3HO75486 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.57■□□□□ 0.88
SUPT3HO75486 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.57■□□□□ 0.88
SUPT3HO75486 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.57■□□□□ 0.88
SUPT3HO75486 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.57■□□□□ 0.88
SUPT3HO75486 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.57■□□□□ 0.88
SUPT3HO75486 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUPT3HO75486 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SUPT3HO75486 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SUPT3HO75486 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SUPT3HO75486 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.56■□□□□ 0.88
SUPT3HO75486 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SUPT3HO75486 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.56■□□□□ 0.88
SUPT3HO75486 SUDS3P1-201ENST00000505831 966 ntBASIC20.56■□□□□ 0.88
SUPT3HO75486 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
SUPT3HO75486 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SUPT3HO75486 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SUPT3HO75486 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUPT3HO75486 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SUPT3HO75486 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SUPT3HO75486 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
SUPT3HO75486 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.55■□□□□ 0.88
SUPT3HO75486 AC012414.1-201ENST00000556676 535 ntBASIC20.55■□□□□ 0.88
SUPT3HO75486 AC142381.2-201ENST00000566120 298 ntBASIC20.55■□□□□ 0.88
SUPT3HO75486 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.55■□□□□ 0.88
SUPT3HO75486 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
SUPT3HO75486 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.55■□□□□ 0.88
SUPT3HO75486 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SUPT3HO75486 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SUPT3HO75486 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.54■□□□□ 0.88
SUPT3HO75486 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SUPT3HO75486 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.54■□□□□ 0.88
SUPT3HO75486 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.54■□□□□ 0.88
SUPT3HO75486 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.54■□□□□ 0.88
SUPT3HO75486 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.54■□□□□ 0.88
SUPT3HO75486 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.54■□□□□ 0.88
SUPT3HO75486 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.54■□□□□ 0.88
SUPT3HO75486 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.54■□□□□ 0.88
SUPT3HO75486 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SUPT3HO75486 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SUPT3HO75486 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms