Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.17■□□□□ 0.98
PMPCBO75439 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.17■□□□□ 0.98
PMPCBO75439 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMPCBO75439 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMPCBO75439 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.17■□□□□ 0.98
PMPCBO75439 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.17■□□□□ 0.98
PMPCBO75439 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMPCBO75439 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.17■□□□□ 0.98
PMPCBO75439 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
PMPCBO75439 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.16■□□□□ 0.98
PMPCBO75439 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
PMPCBO75439 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.16■□□□□ 0.98
PMPCBO75439 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.16■□□□□ 0.98
PMPCBO75439 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PMPCBO75439 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PMPCBO75439 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.15■□□□□ 0.98
PMPCBO75439 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.15■□□□□ 0.98
PMPCBO75439 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PMPCBO75439 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.15■□□□□ 0.98
PMPCBO75439 SLC7A5P2-201ENST00000553010 536 ntBASIC21.15■□□□□ 0.98
PMPCBO75439 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.15■□□□□ 0.98
PMPCBO75439 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.15■□□□□ 0.98
PMPCBO75439 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PMPCBO75439 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
PMPCBO75439 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PMPCBO75439 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PMPCBO75439 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PMPCBO75439 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PMPCBO75439 KRT19P1-201ENST00000405746 1186 ntBASIC21.14■□□□□ 0.97
PMPCBO75439 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.14■□□□□ 0.97
PMPCBO75439 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.14■□□□□ 0.97
PMPCBO75439 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PMPCBO75439 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PMPCBO75439 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PMPCBO75439 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PMPCBO75439 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
PMPCBO75439 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
PMPCBO75439 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PMPCBO75439 AC120498.10-201ENST00000621827 505 ntBASIC21.13■□□□□ 0.97
PMPCBO75439 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.13■□□□□ 0.97
PMPCBO75439 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.13■□□□□ 0.97
PMPCBO75439 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMPCBO75439 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.12■□□□□ 0.97
PMPCBO75439 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
PMPCBO75439 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PMPCBO75439 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.12■□□□□ 0.97
PMPCBO75439 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMPCBO75439 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.11■□□□□ 0.97
PMPCBO75439 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
PMPCBO75439 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PMPCBO75439 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMPCBO75439 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMPCBO75439 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMPCBO75439 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PMPCBO75439 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PMPCBO75439 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMPCBO75439 KRT16P2-201ENST00000414673 1423 ntBASIC21.11■□□□□ 0.97
PMPCBO75439 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms