Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM3O75382 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM3O75382 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM3O75382 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM3O75382 AC138907.5-202ENST00000569484 235 ntBASIC19.37■□□□□ 0.69
TRIM3O75382 AC053503.5-201ENST00000601508 636 ntBASIC19.37■□□□□ 0.69
TRIM3O75382 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM3O75382 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM3O75382 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM3O75382 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM3O75382 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM3O75382 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM3O75382 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM3O75382 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM3O75382 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM3O75382 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM3O75382 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM3O75382 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM3O75382 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM3O75382 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 KRT18P11-201ENST00000435214 1283 ntBASIC19.35■□□□□ 0.69
TRIM3O75382 AC010141.2-201ENST00000452426 721 ntBASIC19.35■□□□□ 0.69
TRIM3O75382 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM3O75382 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM3O75382 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM3O75382 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM3O75382 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
TRIM3O75382 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.34■□□□□ 0.69
TRIM3O75382 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM3O75382 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM3O75382 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM3O75382 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM3O75382 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM3O75382 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 RARRES2P11-201ENST00000635158 484 ntBASIC19.34■□□□□ 0.69
TRIM3O75382 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM3O75382 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM3O75382 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRIM3O75382 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM3O75382 AC003102.1-202ENST00000563394 1796 ntBASIC19.34■□□□□ 0.69
TRIM3O75382 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM3O75382 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM3O75382 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM3O75382 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRIM3O75382 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRIM3O75382 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRIM3O75382 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRIM3O75382 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM3O75382 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRIM3O75382 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM3O75382 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM3O75382 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM3O75382 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms