Protein–RNA interactions for Protein: O60763

USO1, General vesicular transport factor p115, humanhuman

Known RBP Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USO1O60763 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
USO1O60763 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USO1O60763 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
USO1O60763 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USO1O60763 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
USO1O60763 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
USO1O60763 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.37■■□□□ 1.33
USO1O60763 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
USO1O60763 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 POU5F1P4-201ENST00000413175 1085 ntBASIC23.37■■□□□ 1.33
USO1O60763 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.37■■□□□ 1.33
USO1O60763 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.37■■□□□ 1.33
USO1O60763 AC011767.1-201ENST00000617410 1153 ntBASIC23.37■■□□□ 1.33
USO1O60763 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.37■■□□□ 1.33
USO1O60763 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.37■■□□□ 1.33
USO1O60763 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USO1O60763 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.37■■□□□ 1.33
USO1O60763 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.37■■□□□ 1.33
USO1O60763 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.36■■□□□ 1.33
USO1O60763 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.36■■□□□ 1.33
USO1O60763 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.36■■□□□ 1.33
USO1O60763 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.36■■□□□ 1.33
USO1O60763 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
USO1O60763 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USO1O60763 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.35■■□□□ 1.33
USO1O60763 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USO1O60763 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USO1O60763 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USO1O60763 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USO1O60763 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USO1O60763 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
USO1O60763 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
USO1O60763 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.35■■□□□ 1.33
USO1O60763 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
USO1O60763 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.35■■□□□ 1.33
USO1O60763 AC080038.1-201ENST00000611274 1154 ntBASIC23.35■■□□□ 1.33
USO1O60763 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USO1O60763 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.35■■□□□ 1.33
USO1O60763 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.35■■□□□ 1.33
USO1O60763 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.35■■□□□ 1.33
USO1O60763 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.35■■□□□ 1.33
USO1O60763 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.34■■□□□ 1.33
USO1O60763 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
USO1O60763 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
USO1O60763 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.34■■□□□ 1.33
USO1O60763 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.34■■□□□ 1.33
USO1O60763 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.34■■□□□ 1.33
USO1O60763 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.34■■□□□ 1.33
USO1O60763 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 AC120498.10-201ENST00000621827 505 ntBASIC23.34■■□□□ 1.33
USO1O60763 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.34■■□□□ 1.33
USO1O60763 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USO1O60763 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.34■■□□□ 1.33
USO1O60763 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.34■■□□□ 1.33
USO1O60763 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
USO1O60763 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
USO1O60763 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.33■■□□□ 1.33
USO1O60763 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.33■■□□□ 1.33
USO1O60763 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.33■■□□□ 1.33
USO1O60763 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USO1O60763 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.33■■□□□ 1.33
USO1O60763 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
USO1O60763 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.33■■□□□ 1.32
USO1O60763 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms