Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ZIC3O60481 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC3O60481 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZIC3O60481 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC3O60481 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.84■□□□□ 0.61
ZIC3O60481 MIR663A-201ENST00000385250 93 ntBASIC18.84■□□□□ 0.61
ZIC3O60481 AC091799.1-201ENST00000422823 811 ntBASIC18.84■□□□□ 0.61
ZIC3O60481 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.84■□□□□ 0.61
ZIC3O60481 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.84■□□□□ 0.61
ZIC3O60481 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.84■□□□□ 0.61
ZIC3O60481 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.84■□□□□ 0.61
ZIC3O60481 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZIC3O60481 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZIC3O60481 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZIC3O60481 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZIC3O60481 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ZIC3O60481 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZIC3O60481 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ZIC3O60481 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC3O60481 AC006970.2-201ENST00000450065 779 ntBASIC18.83■□□□□ 0.6
ZIC3O60481 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
ZIC3O60481 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.83■□□□□ 0.6
ZIC3O60481 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.83■□□□□ 0.6
ZIC3O60481 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.83■□□□□ 0.6
ZIC3O60481 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZIC3O60481 AL591742.1-201ENST00000604433 565 ntBASIC18.83■□□□□ 0.6
ZIC3O60481 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.83■□□□□ 0.6
ZIC3O60481 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC3O60481 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC3O60481 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZIC3O60481 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.83■□□□□ 0.6
ZIC3O60481 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.83■□□□□ 0.6
ZIC3O60481 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZIC3O60481 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZIC3O60481 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZIC3O60481 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC3O60481 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 NCF1B-203ENST00000435988 1254 ntBASIC18.82■□□□□ 0.6
ZIC3O60481 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC3O60481 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.82■□□□□ 0.6
ZIC3O60481 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.82■□□□□ 0.6
ZIC3O60481 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZIC3O60481 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZIC3O60481 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
ZIC3O60481 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ZIC3O60481 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.81■□□□□ 0.6
ZIC3O60481 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 AL162412.1-201ENST00000567129 965 ntBASIC18.81■□□□□ 0.6
ZIC3O60481 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.81■□□□□ 0.6
ZIC3O60481 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ZIC3O60481 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZIC3O60481 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.81■□□□□ 0.6
ZIC3O60481 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
ZIC3O60481 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.8■□□□□ 0.6
ZIC3O60481 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ZIC3O60481 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZIC3O60481 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
ZIC3O60481 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.8■□□□□ 0.6
ZIC3O60481 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.8■□□□□ 0.6
ZIC3O60481 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
ZIC3O60481 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZIC3O60481 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZIC3O60481 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.79■□□□□ 0.6
ZIC3O60481 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZIC3O60481 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ZIC3O60481 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.79■□□□□ 0.6
ZIC3O60481 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZIC3O60481 ID1-201ENST00000376105 1233 ntBASIC18.79■□□□□ 0.6
ZIC3O60481 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms