Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.72■□□□□ 0.75
URB1O60287 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.72■□□□□ 0.75
URB1O60287 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
URB1O60287 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
URB1O60287 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
URB1O60287 TMPOP1-202ENST00000424642 1267 ntBASIC19.71■□□□□ 0.75
URB1O60287 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.71■□□□□ 0.75
URB1O60287 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.71■□□□□ 0.75
URB1O60287 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.71■□□□□ 0.75
URB1O60287 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
URB1O60287 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
URB1O60287 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
URB1O60287 MIR4785-201ENST00000585005 73 ntBASIC19.71■□□□□ 0.75
URB1O60287 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
URB1O60287 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
URB1O60287 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
URB1O60287 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
URB1O60287 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
URB1O60287 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
URB1O60287 TSPY15P-201ENST00000457163 923 ntBASIC19.7■□□□□ 0.74
URB1O60287 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.7■□□□□ 0.74
URB1O60287 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.7■□□□□ 0.74
URB1O60287 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.7■□□□□ 0.74
URB1O60287 AP001412.1-201ENST00000608405 714 ntBASIC19.7■□□□□ 0.74
URB1O60287 LINC00526-201ENST00000581067 1875 ntBASIC19.7■□□□□ 0.74
URB1O60287 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
URB1O60287 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
URB1O60287 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.7■□□□□ 0.74
URB1O60287 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
URB1O60287 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
URB1O60287 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.69■□□□□ 0.74
URB1O60287 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.69■□□□□ 0.74
URB1O60287 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.69■□□□□ 0.74
URB1O60287 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.69■□□□□ 0.74
URB1O60287 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
URB1O60287 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
URB1O60287 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
URB1O60287 AC100791.3-201ENST00000617619 330 ntBASIC19.69■□□□□ 0.74
URB1O60287 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
URB1O60287 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
URB1O60287 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
URB1O60287 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.68■□□□□ 0.74
URB1O60287 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.68■□□□□ 0.74
URB1O60287 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
URB1O60287 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
URB1O60287 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.68■□□□□ 0.74
URB1O60287 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.68■□□□□ 0.74
URB1O60287 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.68■□□□□ 0.74
URB1O60287 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
URB1O60287 AL135905.2-201ENST00000584934 1404 ntBASIC19.68■□□□□ 0.74
URB1O60287 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
URB1O60287 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.67■□□□□ 0.74
URB1O60287 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.67■□□□□ 0.74
URB1O60287 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
URB1O60287 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
URB1O60287 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
URB1O60287 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
URB1O60287 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.67■□□□□ 0.74
URB1O60287 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.67■□□□□ 0.74
URB1O60287 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.67■□□□□ 0.74
URB1O60287 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.67■□□□□ 0.74
URB1O60287 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms