Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPM1DO15297 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PPM1DO15297 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PPM1DO15297 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.32■□□□□ 0.84
PPM1DO15297 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PPM1DO15297 MIPEPP3-201ENST00000412105 444 ntBASIC20.32■□□□□ 0.84
PPM1DO15297 AL512625.2-201ENST00000417533 625 ntBASIC20.32■□□□□ 0.84
PPM1DO15297 AC073210.2-201ENST00000430369 194 ntBASIC20.32■□□□□ 0.84
PPM1DO15297 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 CD99P1-205ENST00000527459 561 ntBASIC20.32■□□□□ 0.84
PPM1DO15297 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.32■□□□□ 0.84
PPM1DO15297 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.32■□□□□ 0.84
PPM1DO15297 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.32■□□□□ 0.84
PPM1DO15297 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PPM1DO15297 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPM1DO15297 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.31■□□□□ 0.84
PPM1DO15297 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PPM1DO15297 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PPM1DO15297 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PPM1DO15297 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.31■□□□□ 0.84
PPM1DO15297 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.31■□□□□ 0.84
PPM1DO15297 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
PPM1DO15297 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PPM1DO15297 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.31■□□□□ 0.84
PPM1DO15297 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPM1DO15297 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PPM1DO15297 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 ABHD17AP1-201ENST00000358206 933 ntBASIC20.3■□□□□ 0.84
PPM1DO15297 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.3■□□□□ 0.84
PPM1DO15297 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PPM1DO15297 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 AL162412.1-201ENST00000567129 965 ntBASIC20.3■□□□□ 0.84
PPM1DO15297 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.3■□□□□ 0.84
PPM1DO15297 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.3■□□□□ 0.84
PPM1DO15297 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPM1DO15297 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PPM1DO15297 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PPM1DO15297 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.29■□□□□ 0.84
PPM1DO15297 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
PPM1DO15297 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.29■□□□□ 0.84
PPM1DO15297 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PPM1DO15297 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.29■□□□□ 0.84
PPM1DO15297 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.29■□□□□ 0.84
PPM1DO15297 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.29■□□□□ 0.84
PPM1DO15297 MIR4758-201ENST00000577688 71 ntBASIC20.29■□□□□ 0.84
PPM1DO15297 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.29■□□□□ 0.84
PPM1DO15297 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.29■□□□□ 0.84
PPM1DO15297 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPM1DO15297 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.28■□□□□ 0.84
PPM1DO15297 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPM1DO15297 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPM1DO15297 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PPM1DO15297 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPM1DO15297 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPM1DO15297 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PPM1DO15297 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPM1DO15297 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.27■□□□□ 0.84
PPM1DO15297 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PPM1DO15297 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.27■□□□□ 0.84
PPM1DO15297 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPM1DO15297 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms