Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN6O15212 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN6O15212 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN6O15212 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.83■□□□□ 0.93
PFDN6O15212 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PFDN6O15212 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 AP004607.4-201ENST00000530158 1459 ntBASIC20.83■□□□□ 0.93
PFDN6O15212 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.83■□□□□ 0.93
PFDN6O15212 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.83■□□□□ 0.93
PFDN6O15212 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.83■□□□□ 0.93
PFDN6O15212 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.83■□□□□ 0.93
PFDN6O15212 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.83■□□□□ 0.93
PFDN6O15212 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN6O15212 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
PFDN6O15212 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PFDN6O15212 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PFDN6O15212 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.82■□□□□ 0.92
PFDN6O15212 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN6O15212 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.82■□□□□ 0.92
PFDN6O15212 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.82■□□□□ 0.92
PFDN6O15212 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.82■□□□□ 0.92
PFDN6O15212 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN6O15212 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PFDN6O15212 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.81■□□□□ 0.92
PFDN6O15212 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
PFDN6O15212 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
PFDN6O15212 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PFDN6O15212 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.81■□□□□ 0.92
PFDN6O15212 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.81■□□□□ 0.92
PFDN6O15212 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
PFDN6O15212 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN6O15212 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
PFDN6O15212 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.8■□□□□ 0.92
PFDN6O15212 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.8■□□□□ 0.92
PFDN6O15212 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.92
PFDN6O15212 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 AF106564.1-201ENST00000607058 2553 ntBASIC20.8■□□□□ 0.92
PFDN6O15212 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN6O15212 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PFDN6O15212 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PFDN6O15212 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PFDN6O15212 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.79■□□□□ 0.92
PFDN6O15212 AC138907.5-202ENST00000569484 235 ntBASIC20.79■□□□□ 0.92
PFDN6O15212 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN6O15212 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.78■□□□□ 0.92
PFDN6O15212 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.78■□□□□ 0.92
PFDN6O15212 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.78■□□□□ 0.92
PFDN6O15212 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.78■□□□□ 0.92
PFDN6O15212 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.78■□□□□ 0.92
PFDN6O15212 TERF1P2-201ENST00000583350 1212 ntBASIC20.78■□□□□ 0.92
PFDN6O15212 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.78■□□□□ 0.92
PFDN6O15212 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PFDN6O15212 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN6O15212 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PFDN6O15212 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.77■□□□□ 0.92
PFDN6O15212 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PFDN6O15212 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PFDN6O15212 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PFDN6O15212 ZNRF2P3-201ENST00000424200 374 ntBASIC20.77■□□□□ 0.92
PFDN6O15212 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.77■□□□□ 0.92
PFDN6O15212 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN6O15212 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PFDN6O15212 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PFDN6O15212 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms