Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 NUDT16P1-203ENST00000513809 620 ntBASIC19.99■□□□□ 0.79
CACNA1AO00555 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.99■□□□□ 0.79
CACNA1AO00555 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.99■□□□□ 0.79
CACNA1AO00555 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA1AO00555 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 AC022616.7-201ENST00000525383 220 ntBASIC19.98■□□□□ 0.79
CACNA1AO00555 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.98■□□□□ 0.79
CACNA1AO00555 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA1AO00555 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1AO00555 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA1AO00555 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA1AO00555 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.97■□□□□ 0.79
CACNA1AO00555 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
CACNA1AO00555 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.97■□□□□ 0.79
CACNA1AO00555 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.97■□□□□ 0.79
CACNA1AO00555 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.97■□□□□ 0.79
CACNA1AO00555 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 MCRIP2P1-201ENST00000394346 511 ntBASIC19.97■□□□□ 0.79
CACNA1AO00555 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.97■□□□□ 0.79
CACNA1AO00555 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA1AO00555 AP006587.3-201ENST00000525742 1516 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 AC079630.1-202ENST00000618127 1840 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CACNA1AO00555 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA1AO00555 AP000347.1-202ENST00000435868 847 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 AC063952.2-201ENST00000498792 1227 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.96■□□□□ 0.79
CACNA1AO00555 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA1AO00555 AC120498.8-201ENST00000614275 531 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CACNA1AO00555 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA1AO00555 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CACNA1AO00555 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.96■□□□□ 0.79
CACNA1AO00555 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CACNA1AO00555 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1AO00555 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.96■□□□□ 0.79
CACNA1AO00555 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 AP004607.7-201ENST00000527152 1677 ntBASIC19.95■□□□□ 0.78
CACNA1AO00555 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA1AO00555 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNA1AO00555 REXO1L10P-201ENST00000615707 1290 ntBASIC19.95■□□□□ 0.78
CACNA1AO00555 LINC00543-201ENST00000567234 1845 ntBASIC19.95■□□□□ 0.78
CACNA1AO00555 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CACNA1AO00555 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CACNA1AO00555 AL031133.1-201ENST00000406807 723 ntBASIC19.95■□□□□ 0.78
CACNA1AO00555 PVRIG2P-201ENST00000435460 978 ntBASIC19.95■□□□□ 0.78
CACNA1AO00555 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA1AO00555 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1AO00555 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1AO00555 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1AO00555 AC139530.3-201ENST00000620344 690 ntBASIC19.94■□□□□ 0.78
CACNA1AO00555 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CACNA1AO00555 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1AO00555 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1AO00555 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1AO00555 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1AO00555 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1AO00555 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1AO00555 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms