Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16■□□□□ 0.15
NDUFA4O00483 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 AC245052.3-201ENST00000450182 901 ntBASIC16■□□□□ 0.15
NDUFA4O00483 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NDUFA4O00483 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16■□□□□ 0.15
NDUFA4O00483 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16■□□□□ 0.15
NDUFA4O00483 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16■□□□□ 0.15
NDUFA4O00483 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16■□□□□ 0.15
NDUFA4O00483 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16■□□□□ 0.15
NDUFA4O00483 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
NDUFA4O00483 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.99■□□□□ 0.15
NDUFA4O00483 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.99■□□□□ 0.15
NDUFA4O00483 NTF6G-201ENST00000591094 616 ntBASIC15.99■□□□□ 0.15
NDUFA4O00483 AC087623.3-201ENST00000607047 1098 ntBASIC15.99■□□□□ 0.15
NDUFA4O00483 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NDUFA4O00483 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.99■□□□□ 0.15
NDUFA4O00483 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NDUFA4O00483 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.98■□□□□ 0.15
NDUFA4O00483 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.98■□□□□ 0.15
NDUFA4O00483 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.98■□□□□ 0.15
NDUFA4O00483 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.98■□□□□ 0.15
NDUFA4O00483 RARRES2P6-201ENST00000567333 442 ntBASIC15.98■□□□□ 0.15
NDUFA4O00483 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.98■□□□□ 0.15
NDUFA4O00483 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.98■□□□□ 0.15
NDUFA4O00483 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA4O00483 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.98■□□□□ 0.15
NDUFA4O00483 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NDUFA4O00483 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
NDUFA4O00483 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NDUFA4O00483 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFA4O00483 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.97■□□□□ 0.15
NDUFA4O00483 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFA4O00483 SLC7A5P1-201ENST00000568957 537 ntBASIC15.97■□□□□ 0.15
NDUFA4O00483 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NDUFA4O00483 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NDUFA4O00483 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFA4O00483 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NDUFA4O00483 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA4O00483 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NDUFA4O00483 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFA4O00483 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
NDUFA4O00483 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NDUFA4O00483 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFA4O00483 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFA4O00483 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 SLC7A5P2-201ENST00000553010 536 ntBASIC15.96■□□□□ 0.15
NDUFA4O00483 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.96■□□□□ 0.15
NDUFA4O00483 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NDUFA4O00483 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFA4O00483 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFA4O00483 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA4O00483 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFA4O00483 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFA4O00483 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFA4O00483 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms