Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UPK1AO00322 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK1AO00322 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.76■□□□□ 0.75
UPK1AO00322 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 ZNRF2P3-201ENST00000424200 374 ntBASIC19.76■□□□□ 0.75
UPK1AO00322 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.76■□□□□ 0.75
UPK1AO00322 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.76■□□□□ 0.75
UPK1AO00322 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK1AO00322 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK1AO00322 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.76■□□□□ 0.75
UPK1AO00322 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK1AO00322 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UPK1AO00322 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UPK1AO00322 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.75■□□□□ 0.75
UPK1AO00322 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.75■□□□□ 0.75
UPK1AO00322 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UPK1AO00322 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
UPK1AO00322 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK1AO00322 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK1AO00322 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.74■□□□□ 0.75
UPK1AO00322 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK1AO00322 AP005212.1-201ENST00000581547 1997 ntBASIC19.74■□□□□ 0.75
UPK1AO00322 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 GABARAPL3-202ENST00000624044 1851 ntBASIC19.73■□□□□ 0.75
UPK1AO00322 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UPK1AO00322 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
UPK1AO00322 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.73■□□□□ 0.75
UPK1AO00322 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.73■□□□□ 0.75
UPK1AO00322 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.73■□□□□ 0.75
UPK1AO00322 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.73■□□□□ 0.75
UPK1AO00322 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK1AO00322 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK1AO00322 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1AO00322 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UPK1AO00322 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1AO00322 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.72■□□□□ 0.75
UPK1AO00322 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK1AO00322 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UPK1AO00322 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK1AO00322 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK1AO00322 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1AO00322 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPK1AO00322 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK1AO00322 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UPK1AO00322 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
UPK1AO00322 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.71■□□□□ 0.75
UPK1AO00322 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1AO00322 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms