Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMX3A6NHT5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HMX3A6NHT5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 AL031848.2-201ENST00000607670 837 ntBASIC18.03■□□□□ 0.48
HMX3A6NHT5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.03■□□□□ 0.48
HMX3A6NHT5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMX3A6NHT5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMX3A6NHT5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMX3A6NHT5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMX3A6NHT5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMX3A6NHT5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HMX3A6NHT5 AC112907.3-201ENST00000577781 2400 ntBASIC18.02■□□□□ 0.47
HMX3A6NHT5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMX3A6NHT5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.02■□□□□ 0.47
HMX3A6NHT5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMX3A6NHT5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMX3A6NHT5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.02■□□□□ 0.47
HMX3A6NHT5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMX3A6NHT5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.02■□□□□ 0.47
HMX3A6NHT5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.01■□□□□ 0.47
HMX3A6NHT5 C17orf82-201ENST00000623772 1530 ntBASIC18.01■□□□□ 0.47
HMX3A6NHT5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMX3A6NHT5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18■□□□□ 0.47
HMX3A6NHT5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18■□□□□ 0.47
HMX3A6NHT5 AC004448.1-201ENST00000458332 883 ntBASIC18■□□□□ 0.47
HMX3A6NHT5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18■□□□□ 0.47
HMX3A6NHT5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMX3A6NHT5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18■□□□□ 0.47
HMX3A6NHT5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18■□□□□ 0.47
HMX3A6NHT5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18■□□□□ 0.47
HMX3A6NHT5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18■□□□□ 0.47
HMX3A6NHT5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMX3A6NHT5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18■□□□□ 0.47
HMX3A6NHT5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.99■□□□□ 0.47
HMX3A6NHT5 AC138932.1-201ENST00000534164 6830 ntBASIC17.99■□□□□ 0.47
HMX3A6NHT5 AC027702.1-201ENST00000563810 1770 ntBASIC17.99■□□□□ 0.47
HMX3A6NHT5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMX3A6NHT5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMX3A6NHT5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMX3A6NHT5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.99■□□□□ 0.47
HMX3A6NHT5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMX3A6NHT5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HMX3A6NHT5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMX3A6NHT5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.99■□□□□ 0.47
HMX3A6NHT5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms