Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.58■□□□□ 0.57
TVP23AA6NH52 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TVP23AA6NH52 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 RASA4CP-201ENST00000424092 1398 ntBASIC18.58■□□□□ 0.57
TVP23AA6NH52 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.58■□□□□ 0.57
TVP23AA6NH52 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TVP23AA6NH52 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.58■□□□□ 0.57
TVP23AA6NH52 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TVP23AA6NH52 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TVP23AA6NH52 MIR572-201ENST00000384983 95 ntBASIC18.58■□□□□ 0.56
TVP23AA6NH52 MIR939-201ENST00000401314 82 ntBASIC18.58■□□□□ 0.56
TVP23AA6NH52 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 PLK5-205ENST00000642079 1969 ntBASIC18.58■□□□□ 0.56
TVP23AA6NH52 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.58■□□□□ 0.56
TVP23AA6NH52 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.57■□□□□ 0.56
TVP23AA6NH52 LINC01521-201ENST00000504184 1943 ntBASIC18.57■□□□□ 0.56
TVP23AA6NH52 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TVP23AA6NH52 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 FEM1AP1-201ENST00000431297 1995 ntBASIC18.56■□□□□ 0.56
TVP23AA6NH52 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 AC006128.1-201ENST00000624704 1661 ntBASIC18.56■□□□□ 0.56
TVP23AA6NH52 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TVP23AA6NH52 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.56■□□□□ 0.56
TVP23AA6NH52 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TVP23AA6NH52 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TVP23AA6NH52 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TVP23AA6NH52 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 AC091305.1-201ENST00000479476 895 ntBASIC18.55■□□□□ 0.56
TVP23AA6NH52 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 AL031432.3-201ENST00000607698 485 ntBASIC18.55■□□□□ 0.56
TVP23AA6NH52 AL136967.2-201ENST00000623968 743 ntBASIC18.55■□□□□ 0.56
TVP23AA6NH52 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TVP23AA6NH52 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.55■□□□□ 0.56
TVP23AA6NH52 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 AC092667.1-201ENST00000434301 2586 ntBASIC18.54■□□□□ 0.56
TVP23AA6NH52 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.54■□□□□ 0.56
TVP23AA6NH52 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TVP23AA6NH52 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms