Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC162PA2VCL2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCDC162PA2VCL2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC162PA2VCL2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC162PA2VCL2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC162PA2VCL2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 SLC7A5P2-201ENST00000553010 536 ntBASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC162PA2VCL2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 AC034268.1-201ENST00000441047 882 ntBASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC162PA2VCL2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 AC026271.2-201ENST00000428091 497 ntBASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC162PA2VCL2 KRT16P2-201ENST00000414673 1423 ntBASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 NTF6G-201ENST00000591094 616 ntBASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC162PA2VCL2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC162PA2VCL2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms