Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
TCRBV3S1A0A5B6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV3S1A0A5B6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 KRT125P-201ENST00000546827 989 ntBASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 MIR3181-201ENST00000578512 73 ntBASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 AC010525.1-201ENST00000585559 441 ntBASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV3S1A0A5B6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
TCRBV3S1A0A5B6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TCRBV3S1A0A5B6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.52■□□□□ 0.71
TCRBV3S1A0A5B6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 TCF3P1-201ENST00000423021 1937 ntBASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.51■□□□□ 0.71
TCRBV3S1A0A5B6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV3S1A0A5B6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 AL033527.3-201ENST00000566366 1196 ntBASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 AC099791.2-201ENST00000605725 427 ntBASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBV3S1A0A5B6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms