Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRDV1A0A1B0GX56 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRDV1A0A1B0GX56 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.34■□□□□ 0.53
TRDV1A0A1B0GX56 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRDV1A0A1B0GX56 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRDV1A0A1B0GX56 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 AL020996.1-203ENST00000536896 2307 ntBASIC18.33■□□□□ 0.53
TRDV1A0A1B0GX56 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.33■□□□□ 0.52
TRDV1A0A1B0GX56 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 BX323043.1-201ENST00000641006 1765 ntBASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRDV1A0A1B0GX56 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRDV1A0A1B0GX56 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 AC018445.3-201ENST00000624177 1945 ntBASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 KRT125P-201ENST00000546827 989 ntBASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRDV1A0A1B0GX56 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 FP700111.2-201ENST00000619190 1892 ntBASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRDV1A0A1B0GX56 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms