Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MFSD11-216ENST00000590393 1141 ntBASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC016769.1-201ENST00000409132 1010 ntBASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC092437.1-201ENST00000624794 1048 ntBASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-4A0A0C4DH59 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC010536.3-201ENST00000620306 533 ntBASIC20.58■□□□□ 0.89
TRBV5-4A0A0C4DH59 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-4A0A0C4DH59 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-4A0A0C4DH59 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 TERF1P5-201ENST00000477545 1207 ntBASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-4A0A0C4DH59 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.54■□□□□ 0.88
TRBV5-4A0A0C4DH59 DUX4L16-201ENST00000555130 1264 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms