Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV3-43A0A0B4J1X8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGHV3-43A0A0B4J1X8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AL157384.1-201ENST00000445995 2473 ntBASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC079140.4-201ENST00000507448 529 ntBASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.26■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV3-43A0A0B4J1X8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 EEF1DP3-203ENST00000566025 782 ntBASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IGHV3-43A0A0B4J1X8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms