Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AF213884.3-201ENST00000563833 479 ntBASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AL031602.1-201ENST00000633169 911 ntBASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-3A0A0A6YYJ7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AC010141.3-201ENST00000456659 717 ntBASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SUDS3P1-201ENST00000505831 966 ntBASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AC010525.1-201ENST00000585559 441 ntBASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AL136967.2-201ENST00000623968 743 ntBASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 IGHV3-19-201ENST00000521488 291 ntBASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CA15P2-201ENST00000611168 834 ntBASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AL391422.3-201ENST00000603791 2761 ntBASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms