Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SLC24A5-201ENST00000341459 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 RALYL-205ENST00000521268 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AL078645.2-201ENST00000245811 1325 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AL592486.1-201ENST00000418343 1220 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 FXYD5-205ENST00000423817 892 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SNX31-202ENST00000428383 1265 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC016738.2-201ENST00000439150 493 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 HCG25-220ENST00000450514 759 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 RN7SL449P-201ENST00000464937 286 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC079226.1-201ENST00000513255 444 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 OR9G3P-201ENST00000525553 918 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 OR7E4P-201ENST00000530317 1013 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 LINC02467-201ENST00000542804 637 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC021224.1-201ENST00000573479 857 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 RPIAP1-201ENST00000587900 742 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 APOC1-205ENST00000589781 273 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC011840.6-201ENST00000624536 610 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 LINC02201-202ENST00000511194 1651 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 MYO1C-204ENST00000545534 3676 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 ASH2LP3-201ENST00000436538 1642 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AC024651.1-201ENST00000561121 1963 ntTSL 3 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 FRG2LP-201ENST00000586090 1563 ntBASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 AL031283.2-201ENST00000428747 3105 ntTSL 2 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 DAB2-202ENST00000339788 3690 ntTSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 CAGE1-206ENST00000502583 3284 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SYCE2Q6PIF2 PARM1-202ENST00000513238 4308 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 AP004290.1-201ENST00000440915 1412 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 SLC3A1-210ENST00000611973 1737 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 NPSR1-204ENST00000381542 1369 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 SUCLA2P3-201ENST00000458157 1357 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 TTC12-219ENST00000529221 2315 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 ZNF410-219ENST00000556797 1311 ntTSL 2 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 KXD1-216ENST00000601630 1327 ntTSL 3 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 LINC00346-201ENST00000538077 6265 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 CARD8-AS1-201ENST00000602172 1969 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 FPR2-202ENST00000598776 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 OBP2A-201ENST00000340780 741 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 HPR-201ENST00000356967 1110 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 RPS5P3-201ENST00000414617 616 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 DCTN1-AS1-202ENST00000416630 584 ntTSL 4 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 RPL10P5-201ENST00000427719 639 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 AL606530.1-201ENST00000441783 1250 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 AL356276.1-201ENST00000453692 758 ntTSL 3 BASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 AC092916.2-201ENST00000462510 417 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 RN7SL526P-201ENST00000469492 319 ntBASIC10.67□□□□□ -0.7
SYCE2Q6PIF2 COX17-203ENST00000484810 471 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms