Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMEM55A-201ENST00000285419 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 LIPT1-202ENST00000393473 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC064805.1-202ENST00000569279 3493 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 BCL2L13-211ENST00000493680 2112 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 FPR1-201ENST00000304748 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 SULF2-206ENST00000467815 3905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 GRIA1-203ENST00000448073 2825 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 ZNF835-201ENST00000537055 3450 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 LINC02487-201ENST00000400831 2557 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 IRGM-202ENST00000522154 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SRGAP2-AS1-202ENST00000437515 2504 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 RARS-201ENST00000231572 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 CCNC-203ENST00000369220 2118 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 RBMX2-202ENST00000370947 798 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SPATA6L-202ENST00000381890 1295 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AL450311.2-201ENST00000428753 503 ntTSL 3 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 VN2R9P-201ENST00000431428 953 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC114737.1-201ENST00000434531 453 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 OR52T1P-201ENST00000435078 939 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC114808.1-201ENST00000437132 432 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 MEG8-205ENST00000442197 625 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC007405.1-201ENST00000442456 2149 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC005522.2-201ENST00000479299 453 ntTSL 3 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC106795.2-201ENST00000502514 613 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC116359.1-201ENST00000510731 1099 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC136443.1-201ENST00000526173 355 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SPATA19-202ENST00000532889 653 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 LINC01551-204ENST00000552957 734 ntTSL 3 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC005476.2-201ENST00000555771 509 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 HMGN2P40-201ENST00000566875 391 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 NAPGP1-201ENST00000603818 719 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC092278.1-201ENST00000621951 745 ntBASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 KLF8-204ENST00000468660 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 WIPF2-207ENST00000583130 1529 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 AC010307.3-202ENST00000515122 3142 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 UGT1A6-201ENST00000305139 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 BTN2A3P-203ENST00000465856 2483 ntTSL 2 BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
NPIPA3F8WFD2 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ATP1A3-207ENST00000543770 3427 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL512638.2-201ENST00000425449 2610 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ZNF630-201ENST00000276054 2791 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC055717.1-201ENST00000502221 1986 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 EEF1A1P32-201ENST00000418613 1347 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 CLEC4C-205ENST00000542353 1314 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 EDNRA-201ENST00000324300 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NBPF6-201ENST00000370040 2222 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NBPF4-202ENST00000613157 2222 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 RPS10-202ENST00000344700 650 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 OR11L1-201ENST00000355784 969 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 U3.24-201ENST00000391177 215 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL627402.1-201ENST00000405276 735 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 SLC25A20P1-201ENST00000408043 903 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 GTF3C2-AS1-201ENST00000416453 863 ntTSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms